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NMR-based plasma metabolic profiling in patients with unstable angina
OBJECTIVE(S): Unstable angina (UA) is a form of the acute coronary syndrome (ACS) that affects more than a third of the population before age 70. Due to the limitations of diagnostic tests, appropriate identification of UA is difficult. In this study, we proceeded to investigate metabolite profiling...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Mashhad University of Medical Sciences
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7229510/ https://www.ncbi.nlm.nih.gov/pubmed/32440317 http://dx.doi.org/10.22038/IJBMS.2020.39979.9475 |
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author | PouralijanAmiri, Mohammad Khoshkam, Maryam Madadi, Reza Kamali, Koorosh Faghanzadeh Ganji, Ghassem Salek, Reza Ramazani, Ali |
author_facet | PouralijanAmiri, Mohammad Khoshkam, Maryam Madadi, Reza Kamali, Koorosh Faghanzadeh Ganji, Ghassem Salek, Reza Ramazani, Ali |
author_sort | PouralijanAmiri, Mohammad |
collection | PubMed |
description | OBJECTIVE(S): Unstable angina (UA) is a form of the acute coronary syndrome (ACS) that affects more than a third of the population before age 70. Due to the limitations of diagnostic tests, appropriate identification of UA is difficult. In this study, we proceeded to investigate metabolite profiling in UA patients compared with controls to determine potential candidate biomarkers. MATERIALS AND METHODS: Ninety-four plasma samples from UA and 32 samples from controls were analyzed based on 1H NMR spectroscopy. The raw data were processed, analyzed, and subjected to partial least squares-discrimination analysis (PLS-DA), a supervised classification method with a good separation of control and UA patients was observed. The most important variables (VIP) ≥1 were selected and submitted to MetaboAnalyst pathway enrichment to identify the most important ones. RESULTS: We identified 17 disturbed metabolites in UA patients in comparison with the controls. These metabolites are involved in various biochemical pathways such as steroid hormone biosynthesis, aminoacyl-tRNA biosynthesis, and lysine degradation. Some of the metabolites were deoxycorticosterone, 17-hydroxyprogesterone, androstenedione, androstanedione, etiocholanolone, estradiol, 2-hydroxyestradiol, 2-hydroxyestrone, 2-methoxyestradiol, and 2-methoxyestrone. In order to determine test applicability in diagnosing UA, a diagnostic model was further created using the receiver operator characteristic (ROC) curve. The areas under the curve (AUC), sensitivity, specificity, and precision were 0.87, 90%, 65%, and 91%, respectively, for diagnosing of UA. CONCLUSION: These metabolites could not only be useful for the diagnosis of UA patients but also provide more information for further deciphering of the biological processes of UA. |
format | Online Article Text |
id | pubmed-7229510 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Mashhad University of Medical Sciences |
record_format | MEDLINE/PubMed |
spelling | pubmed-72295102020-05-21 NMR-based plasma metabolic profiling in patients with unstable angina PouralijanAmiri, Mohammad Khoshkam, Maryam Madadi, Reza Kamali, Koorosh Faghanzadeh Ganji, Ghassem Salek, Reza Ramazani, Ali Iran J Basic Med Sci Original Article OBJECTIVE(S): Unstable angina (UA) is a form of the acute coronary syndrome (ACS) that affects more than a third of the population before age 70. Due to the limitations of diagnostic tests, appropriate identification of UA is difficult. In this study, we proceeded to investigate metabolite profiling in UA patients compared with controls to determine potential candidate biomarkers. MATERIALS AND METHODS: Ninety-four plasma samples from UA and 32 samples from controls were analyzed based on 1H NMR spectroscopy. The raw data were processed, analyzed, and subjected to partial least squares-discrimination analysis (PLS-DA), a supervised classification method with a good separation of control and UA patients was observed. The most important variables (VIP) ≥1 were selected and submitted to MetaboAnalyst pathway enrichment to identify the most important ones. RESULTS: We identified 17 disturbed metabolites in UA patients in comparison with the controls. These metabolites are involved in various biochemical pathways such as steroid hormone biosynthesis, aminoacyl-tRNA biosynthesis, and lysine degradation. Some of the metabolites were deoxycorticosterone, 17-hydroxyprogesterone, androstenedione, androstanedione, etiocholanolone, estradiol, 2-hydroxyestradiol, 2-hydroxyestrone, 2-methoxyestradiol, and 2-methoxyestrone. In order to determine test applicability in diagnosing UA, a diagnostic model was further created using the receiver operator characteristic (ROC) curve. The areas under the curve (AUC), sensitivity, specificity, and precision were 0.87, 90%, 65%, and 91%, respectively, for diagnosing of UA. CONCLUSION: These metabolites could not only be useful for the diagnosis of UA patients but also provide more information for further deciphering of the biological processes of UA. Mashhad University of Medical Sciences 2020-03 /pmc/articles/PMC7229510/ /pubmed/32440317 http://dx.doi.org/10.22038/IJBMS.2020.39979.9475 Text en This is an Open Access article distributed under the terms of the Creative Commons Attribution License, (http://creativecommons.org/licenses/by/3.0/) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article PouralijanAmiri, Mohammad Khoshkam, Maryam Madadi, Reza Kamali, Koorosh Faghanzadeh Ganji, Ghassem Salek, Reza Ramazani, Ali NMR-based plasma metabolic profiling in patients with unstable angina |
title | NMR-based plasma metabolic profiling in patients with unstable angina |
title_full | NMR-based plasma metabolic profiling in patients with unstable angina |
title_fullStr | NMR-based plasma metabolic profiling in patients with unstable angina |
title_full_unstemmed | NMR-based plasma metabolic profiling in patients with unstable angina |
title_short | NMR-based plasma metabolic profiling in patients with unstable angina |
title_sort | nmr-based plasma metabolic profiling in patients with unstable angina |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7229510/ https://www.ncbi.nlm.nih.gov/pubmed/32440317 http://dx.doi.org/10.22038/IJBMS.2020.39979.9475 |
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