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Spectrum of Genetic Variants Associated with Anterior Segment Dysgenesis in South Florida

Anterior segment dysgenesis (ASD) comprises a wide spectrum of developmental conditions affecting the cornea, iris, and lens, which may be associated with abnormalities of other organs. To identify disease-causing variants, we performed exome sequencing in 24 South Florida families with ASD. We iden...

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Detalles Bibliográficos
Autores principales: Thanikachalam, Saradadevi, Hodapp, Elizabeth, Chang, Ta C., Morel Swols, Dayna, Cengiz, Filiz B., Guo, Shengru, Zafeer, Mohammad F., Seyhan, Serhat, Bademci, Guney, Scott, William K., Grajewski, Alana, Tekin, Mustafa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7230952/
https://www.ncbi.nlm.nih.gov/pubmed/32224865
http://dx.doi.org/10.3390/genes11040350
Descripción
Sumario:Anterior segment dysgenesis (ASD) comprises a wide spectrum of developmental conditions affecting the cornea, iris, and lens, which may be associated with abnormalities of other organs. To identify disease-causing variants, we performed exome sequencing in 24 South Florida families with ASD. We identified 12 likely causative variants in 10 families (42%), including single nucleotide or small insertion–deletion variants in B3GLCT, BMP4, CYP1B1, FOXC1, FOXE3, GJA1, PXDN, and TP63, and a large copy number variant involving PAX6. Four variants were novel. Each variant was detected only in one family. Likely causative variants were detected in 1 out of 7 black and 9 out of 17 white families. In conclusion, exome sequencing for ASD allows us to identify a wide spectrum of rare DNA variants in South Florida. Further studies will explore missing variants, especially in the black communities.