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Domesticated gag Gene of Drosophila LTR Retrotransposons Is Involved in Response to Oxidative Stress
Drosophila melanogaster is one of the most extensively used genetic model organisms for studying LTR retrotransposons that are represented by various groups in its genome. However, the phenomenon of molecular domestication of LTR retrotransposons has been insufficiently studied in Drosophila, as wel...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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MDPI
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7231272/ https://www.ncbi.nlm.nih.gov/pubmed/32268600 http://dx.doi.org/10.3390/genes11040396 |
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author | Makhnovskii, Pavel Balakireva, Yevheniia Nefedova, Lidia Lavrenov, Anton Kuzmin, Ilya Kim, Alexander |
author_facet | Makhnovskii, Pavel Balakireva, Yevheniia Nefedova, Lidia Lavrenov, Anton Kuzmin, Ilya Kim, Alexander |
author_sort | Makhnovskii, Pavel |
collection | PubMed |
description | Drosophila melanogaster is one of the most extensively used genetic model organisms for studying LTR retrotransposons that are represented by various groups in its genome. However, the phenomenon of molecular domestication of LTR retrotransposons has been insufficiently studied in Drosophila, as well as in other invertebrates. The present work is devoted to studying the role of the domesticated gag gene, Gagr, in the Drosophila genome. The Gagr gene has been shown to be involved in the response to stress caused by exposure to ammonium persulfate, but not in the stress response to oligomycin A, zeomycin, and cadmium chloride. Ammonium persulfate tissue specifically activates the expression of Gagr in the tissues of the carcass, but not in the gut. We found that the Gagr gene promoter contains one binding motif for the transcription factor kayak, a component of the JNK signaling pathway, and two binding motifs for the transcription factor Stat92E, a component of the Jak-STAT signaling pathway. Remarkably, Gagr orthologs contain the second binding motif for Stat92E only in D. melanogaster, D. simulans and D. sechellia, whereas in D. yakuba and D. erecta, Gagr orthologs contain a single motif, and there are no binding sites for Stat92E in the promoters of Gagr orthologs in D. ananassae and in species outside the melanogaster group. The data obtained indicate the formation of the protective function of the Gagr gene during evolution. |
format | Online Article Text |
id | pubmed-7231272 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-72312722020-05-22 Domesticated gag Gene of Drosophila LTR Retrotransposons Is Involved in Response to Oxidative Stress Makhnovskii, Pavel Balakireva, Yevheniia Nefedova, Lidia Lavrenov, Anton Kuzmin, Ilya Kim, Alexander Genes (Basel) Article Drosophila melanogaster is one of the most extensively used genetic model organisms for studying LTR retrotransposons that are represented by various groups in its genome. However, the phenomenon of molecular domestication of LTR retrotransposons has been insufficiently studied in Drosophila, as well as in other invertebrates. The present work is devoted to studying the role of the domesticated gag gene, Gagr, in the Drosophila genome. The Gagr gene has been shown to be involved in the response to stress caused by exposure to ammonium persulfate, but not in the stress response to oligomycin A, zeomycin, and cadmium chloride. Ammonium persulfate tissue specifically activates the expression of Gagr in the tissues of the carcass, but not in the gut. We found that the Gagr gene promoter contains one binding motif for the transcription factor kayak, a component of the JNK signaling pathway, and two binding motifs for the transcription factor Stat92E, a component of the Jak-STAT signaling pathway. Remarkably, Gagr orthologs contain the second binding motif for Stat92E only in D. melanogaster, D. simulans and D. sechellia, whereas in D. yakuba and D. erecta, Gagr orthologs contain a single motif, and there are no binding sites for Stat92E in the promoters of Gagr orthologs in D. ananassae and in species outside the melanogaster group. The data obtained indicate the formation of the protective function of the Gagr gene during evolution. MDPI 2020-04-06 /pmc/articles/PMC7231272/ /pubmed/32268600 http://dx.doi.org/10.3390/genes11040396 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Makhnovskii, Pavel Balakireva, Yevheniia Nefedova, Lidia Lavrenov, Anton Kuzmin, Ilya Kim, Alexander Domesticated gag Gene of Drosophila LTR Retrotransposons Is Involved in Response to Oxidative Stress |
title | Domesticated gag Gene of Drosophila LTR Retrotransposons Is Involved in Response to Oxidative Stress |
title_full | Domesticated gag Gene of Drosophila LTR Retrotransposons Is Involved in Response to Oxidative Stress |
title_fullStr | Domesticated gag Gene of Drosophila LTR Retrotransposons Is Involved in Response to Oxidative Stress |
title_full_unstemmed | Domesticated gag Gene of Drosophila LTR Retrotransposons Is Involved in Response to Oxidative Stress |
title_short | Domesticated gag Gene of Drosophila LTR Retrotransposons Is Involved in Response to Oxidative Stress |
title_sort | domesticated gag gene of drosophila ltr retrotransposons is involved in response to oxidative stress |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7231272/ https://www.ncbi.nlm.nih.gov/pubmed/32268600 http://dx.doi.org/10.3390/genes11040396 |
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