Cargando…
Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins
During its first two and a half months, the recently emerged 2019 novel coronavirus, SARS-CoV-2, has already infected over one-hundred thousand people worldwide and has taken more than four thousand lives. However, the swiftly spreading virus also caused an unprecedentedly rapid response from the re...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7232164/ https://www.ncbi.nlm.nih.gov/pubmed/32218151 http://dx.doi.org/10.3390/v12040360 |
_version_ | 1783535324150890496 |
---|---|
author | Srinivasan, Suhas Cui, Hongzhu Gao, Ziyang Liu, Ming Lu, Senbao Mkandawire, Winnie Narykov, Oleksandr Sun, Mo Korkin, Dmitry |
author_facet | Srinivasan, Suhas Cui, Hongzhu Gao, Ziyang Liu, Ming Lu, Senbao Mkandawire, Winnie Narykov, Oleksandr Sun, Mo Korkin, Dmitry |
author_sort | Srinivasan, Suhas |
collection | PubMed |
description | During its first two and a half months, the recently emerged 2019 novel coronavirus, SARS-CoV-2, has already infected over one-hundred thousand people worldwide and has taken more than four thousand lives. However, the swiftly spreading virus also caused an unprecedentedly rapid response from the research community facing the unknown health challenge of potentially enormous proportions. Unfortunately, the experimental research to understand the molecular mechanisms behind the viral infection and to design a vaccine or antivirals is costly and takes months to develop. To expedite the advancement of our knowledge, we leveraged data about the related coronaviruses that is readily available in public databases and integrated these data into a single computational pipeline. As a result, we provide comprehensive structural genomics and interactomics roadmaps of SARS-CoV-2 and use this information to infer the possible functional differences and similarities with the related SARS coronavirus. All data are made publicly available to the research community. |
format | Online Article Text |
id | pubmed-7232164 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-72321642020-05-22 Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins Srinivasan, Suhas Cui, Hongzhu Gao, Ziyang Liu, Ming Lu, Senbao Mkandawire, Winnie Narykov, Oleksandr Sun, Mo Korkin, Dmitry Viruses Article During its first two and a half months, the recently emerged 2019 novel coronavirus, SARS-CoV-2, has already infected over one-hundred thousand people worldwide and has taken more than four thousand lives. However, the swiftly spreading virus also caused an unprecedentedly rapid response from the research community facing the unknown health challenge of potentially enormous proportions. Unfortunately, the experimental research to understand the molecular mechanisms behind the viral infection and to design a vaccine or antivirals is costly and takes months to develop. To expedite the advancement of our knowledge, we leveraged data about the related coronaviruses that is readily available in public databases and integrated these data into a single computational pipeline. As a result, we provide comprehensive structural genomics and interactomics roadmaps of SARS-CoV-2 and use this information to infer the possible functional differences and similarities with the related SARS coronavirus. All data are made publicly available to the research community. MDPI 2020-03-25 /pmc/articles/PMC7232164/ /pubmed/32218151 http://dx.doi.org/10.3390/v12040360 Text en © 2020 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Srinivasan, Suhas Cui, Hongzhu Gao, Ziyang Liu, Ming Lu, Senbao Mkandawire, Winnie Narykov, Oleksandr Sun, Mo Korkin, Dmitry Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins |
title | Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins |
title_full | Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins |
title_fullStr | Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins |
title_full_unstemmed | Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins |
title_short | Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins |
title_sort | structural genomics of sars-cov-2 indicates evolutionary conserved functional regions of viral proteins |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7232164/ https://www.ncbi.nlm.nih.gov/pubmed/32218151 http://dx.doi.org/10.3390/v12040360 |
work_keys_str_mv | AT srinivasansuhas structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins AT cuihongzhu structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins AT gaoziyang structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins AT liuming structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins AT lusenbao structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins AT mkandawirewinnie structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins AT narykovoleksandr structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins AT sunmo structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins AT korkindmitry structuralgenomicsofsarscov2indicatesevolutionaryconservedfunctionalregionsofviralproteins |