Cargando…
Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models
A new approach is presented to obtain candidate structures from atomic pair distribution function (PDF) data in a highly automated way. It fetches, from web-based structural databases, all the structures meeting the experimenter’s search criteria and performs structure refinements on them without hu...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7233026/ https://www.ncbi.nlm.nih.gov/pubmed/32356790 http://dx.doi.org/10.1107/S2053273320002028 |
_version_ | 1783535487404736512 |
---|---|
author | Yang, Long Juhás, Pavol Terban, Maxwell W. Tucker, Matthew G. Billinge, Simon J. L. |
author_facet | Yang, Long Juhás, Pavol Terban, Maxwell W. Tucker, Matthew G. Billinge, Simon J. L. |
author_sort | Yang, Long |
collection | PubMed |
description | A new approach is presented to obtain candidate structures from atomic pair distribution function (PDF) data in a highly automated way. It fetches, from web-based structural databases, all the structures meeting the experimenter’s search criteria and performs structure refinements on them without human intervention. It supports both X-ray and neutron PDFs. Tests on various material systems show the effectiveness and robustness of the algorithm in finding the correct atomic crystal structure. It works on crystalline and nanocrystalline materials including complex oxide nanoparticles and nanowires, low-symmetry and locally distorted structures, and complicated doped and magnetic materials. This approach could greatly reduce the traditional structure searching work and enable the possibility of high-throughput real-time auto-analysis PDF experiments in the future. |
format | Online Article Text |
id | pubmed-7233026 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-72330262020-06-09 Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models Yang, Long Juhás, Pavol Terban, Maxwell W. Tucker, Matthew G. Billinge, Simon J. L. Acta Crystallogr A Found Adv Research Papers A new approach is presented to obtain candidate structures from atomic pair distribution function (PDF) data in a highly automated way. It fetches, from web-based structural databases, all the structures meeting the experimenter’s search criteria and performs structure refinements on them without human intervention. It supports both X-ray and neutron PDFs. Tests on various material systems show the effectiveness and robustness of the algorithm in finding the correct atomic crystal structure. It works on crystalline and nanocrystalline materials including complex oxide nanoparticles and nanowires, low-symmetry and locally distorted structures, and complicated doped and magnetic materials. This approach could greatly reduce the traditional structure searching work and enable the possibility of high-throughput real-time auto-analysis PDF experiments in the future. International Union of Crystallography 2020-04-28 /pmc/articles/PMC7233026/ /pubmed/32356790 http://dx.doi.org/10.1107/S2053273320002028 Text en © Long Yang et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Papers Yang, Long Juhás, Pavol Terban, Maxwell W. Tucker, Matthew G. Billinge, Simon J. L. Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models |
title | Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models |
title_full | Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models |
title_fullStr | Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models |
title_full_unstemmed | Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models |
title_short | Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models |
title_sort | structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7233026/ https://www.ncbi.nlm.nih.gov/pubmed/32356790 http://dx.doi.org/10.1107/S2053273320002028 |
work_keys_str_mv | AT yanglong structureminingscreeningstructuremodelsbyautomatedfittingtotheatomicpairdistributionfunctionoverlargenumbersofmodels AT juhaspavol structureminingscreeningstructuremodelsbyautomatedfittingtotheatomicpairdistributionfunctionoverlargenumbersofmodels AT terbanmaxwellw structureminingscreeningstructuremodelsbyautomatedfittingtotheatomicpairdistributionfunctionoverlargenumbersofmodels AT tuckermatthewg structureminingscreeningstructuremodelsbyautomatedfittingtotheatomicpairdistributionfunctionoverlargenumbersofmodels AT billingesimonjl structureminingscreeningstructuremodelsbyautomatedfittingtotheatomicpairdistributionfunctionoverlargenumbersofmodels |