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Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models

A new approach is presented to obtain candidate structures from atomic pair distribution function (PDF) data in a highly automated way. It fetches, from web-based structural databases, all the structures meeting the experimenter’s search criteria and performs structure refinements on them without hu...

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Detalles Bibliográficos
Autores principales: Yang, Long, Juhás, Pavol, Terban, Maxwell W., Tucker, Matthew G., Billinge, Simon J. L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7233026/
https://www.ncbi.nlm.nih.gov/pubmed/32356790
http://dx.doi.org/10.1107/S2053273320002028
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author Yang, Long
Juhás, Pavol
Terban, Maxwell W.
Tucker, Matthew G.
Billinge, Simon J. L.
author_facet Yang, Long
Juhás, Pavol
Terban, Maxwell W.
Tucker, Matthew G.
Billinge, Simon J. L.
author_sort Yang, Long
collection PubMed
description A new approach is presented to obtain candidate structures from atomic pair distribution function (PDF) data in a highly automated way. It fetches, from web-based structural databases, all the structures meeting the experimenter’s search criteria and performs structure refinements on them without human intervention. It supports both X-ray and neutron PDFs. Tests on various material systems show the effectiveness and robustness of the algorithm in finding the correct atomic crystal structure. It works on crystalline and nanocrystalline materials including complex oxide nanoparticles and nanowires, low-symmetry and locally distorted structures, and complicated doped and magnetic materials. This approach could greatly reduce the traditional structure searching work and enable the possibility of high-throughput real-time auto-analysis PDF experiments in the future.
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spelling pubmed-72330262020-06-09 Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models Yang, Long Juhás, Pavol Terban, Maxwell W. Tucker, Matthew G. Billinge, Simon J. L. Acta Crystallogr A Found Adv Research Papers A new approach is presented to obtain candidate structures from atomic pair distribution function (PDF) data in a highly automated way. It fetches, from web-based structural databases, all the structures meeting the experimenter’s search criteria and performs structure refinements on them without human intervention. It supports both X-ray and neutron PDFs. Tests on various material systems show the effectiveness and robustness of the algorithm in finding the correct atomic crystal structure. It works on crystalline and nanocrystalline materials including complex oxide nanoparticles and nanowires, low-symmetry and locally distorted structures, and complicated doped and magnetic materials. This approach could greatly reduce the traditional structure searching work and enable the possibility of high-throughput real-time auto-analysis PDF experiments in the future. International Union of Crystallography 2020-04-28 /pmc/articles/PMC7233026/ /pubmed/32356790 http://dx.doi.org/10.1107/S2053273320002028 Text en © Long Yang et al. 2020 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Papers
Yang, Long
Juhás, Pavol
Terban, Maxwell W.
Tucker, Matthew G.
Billinge, Simon J. L.
Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models
title Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models
title_full Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models
title_fullStr Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models
title_full_unstemmed Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models
title_short Structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models
title_sort structure-mining: screening structure models by automated fitting to the atomic pair distribution function over large numbers of models
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7233026/
https://www.ncbi.nlm.nih.gov/pubmed/32356790
http://dx.doi.org/10.1107/S2053273320002028
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