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S152. DIAGNOSTIC CLASSIFICATION OF SCHIZOPHRENIA USING 3D CONVOLUTIONAL NEURAL NETWORK WITH RESTING-STATE FUNCTIONAL MRI

BACKGROUND: Several machine-learning (ML) algorithms have been deployed in the diagnostic classification of schizophrenia. Compared to other ML methods, the 3D convolutional neural network (CNN) has an advantage of learning complex and subtle patterns in data and preserving spatial information, whic...

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Autores principales: Kim, Harin, Woo Joo, Sung, Ho Joo, Yeon, Lee, Jungsun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7234740/
http://dx.doi.org/10.1093/schbul/sbaa031.218
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author Kim, Harin
Woo Joo, Sung
Ho Joo, Yeon
Lee, Jungsun
author_facet Kim, Harin
Woo Joo, Sung
Ho Joo, Yeon
Lee, Jungsun
author_sort Kim, Harin
collection PubMed
description BACKGROUND: Several machine-learning (ML) algorithms have been deployed in the diagnostic classification of schizophrenia. Compared to other ML methods, the 3D convolutional neural network (CNN) has an advantage of learning complex and subtle patterns in data and preserving spatial information, which is a more suitable tool for brain imaging data. Although resting-state functional MRI (rsfMRI) data has been used in previous ML studies relating to the diagnostic classification of schizophrenia, a limited number of studies have been conducted using resting-state functional connectivity resulted from group independent component analysis (ICA) and dual regression. The objective of this study was to investigate whether a successful diagnostic classification of schizophrenia vs. healthy controls could be achieved by the 3D CNN using resting-state networks in which areas with a significant group difference in activity existed. METHODS: T1 and rsfMRI data were collected in 46 patients with recent-onset schizophrenia and 22 healthy controls. In the pre-processing steps of rsfMRI, the ICA-based automatic removal of motion artifacts was applied to subject-level ICA results and the resulting rsfMRI data were temporally concatenated for group ICA and dual regression. The executive control and auditory networks had areas with significantly higher activity in the control group compared with the patient group. The independent components (ICs) respective to the executive control and auditory networks were used as input for the 3D CNN model which was developed to discriminate the schizophrenia patients from the healthy controls. RESULTS: The 3D CNN model using the executive control and auditory networks as inputs showed classification accuracies of 65~70%, and error rates of 30~35% approximately. DISCUSSION: Our findings suggest that the 3D CNN model using rsfMRI data can be useful for learning patterns implicated in schizophrenia and identifying discriminative patterns of schizophrenia in brain imaging data.
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spelling pubmed-72347402020-05-23 S152. DIAGNOSTIC CLASSIFICATION OF SCHIZOPHRENIA USING 3D CONVOLUTIONAL NEURAL NETWORK WITH RESTING-STATE FUNCTIONAL MRI Kim, Harin Woo Joo, Sung Ho Joo, Yeon Lee, Jungsun Schizophr Bull Poster Session I BACKGROUND: Several machine-learning (ML) algorithms have been deployed in the diagnostic classification of schizophrenia. Compared to other ML methods, the 3D convolutional neural network (CNN) has an advantage of learning complex and subtle patterns in data and preserving spatial information, which is a more suitable tool for brain imaging data. Although resting-state functional MRI (rsfMRI) data has been used in previous ML studies relating to the diagnostic classification of schizophrenia, a limited number of studies have been conducted using resting-state functional connectivity resulted from group independent component analysis (ICA) and dual regression. The objective of this study was to investigate whether a successful diagnostic classification of schizophrenia vs. healthy controls could be achieved by the 3D CNN using resting-state networks in which areas with a significant group difference in activity existed. METHODS: T1 and rsfMRI data were collected in 46 patients with recent-onset schizophrenia and 22 healthy controls. In the pre-processing steps of rsfMRI, the ICA-based automatic removal of motion artifacts was applied to subject-level ICA results and the resulting rsfMRI data were temporally concatenated for group ICA and dual regression. The executive control and auditory networks had areas with significantly higher activity in the control group compared with the patient group. The independent components (ICs) respective to the executive control and auditory networks were used as input for the 3D CNN model which was developed to discriminate the schizophrenia patients from the healthy controls. RESULTS: The 3D CNN model using the executive control and auditory networks as inputs showed classification accuracies of 65~70%, and error rates of 30~35% approximately. DISCUSSION: Our findings suggest that the 3D CNN model using rsfMRI data can be useful for learning patterns implicated in schizophrenia and identifying discriminative patterns of schizophrenia in brain imaging data. Oxford University Press 2020-05 2020-05-18 /pmc/articles/PMC7234740/ http://dx.doi.org/10.1093/schbul/sbaa031.218 Text en © The Author(s) 2020. Published by Oxford University Press on behalf of the Maryland Psychiatric Research Center. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Poster Session I
Kim, Harin
Woo Joo, Sung
Ho Joo, Yeon
Lee, Jungsun
S152. DIAGNOSTIC CLASSIFICATION OF SCHIZOPHRENIA USING 3D CONVOLUTIONAL NEURAL NETWORK WITH RESTING-STATE FUNCTIONAL MRI
title S152. DIAGNOSTIC CLASSIFICATION OF SCHIZOPHRENIA USING 3D CONVOLUTIONAL NEURAL NETWORK WITH RESTING-STATE FUNCTIONAL MRI
title_full S152. DIAGNOSTIC CLASSIFICATION OF SCHIZOPHRENIA USING 3D CONVOLUTIONAL NEURAL NETWORK WITH RESTING-STATE FUNCTIONAL MRI
title_fullStr S152. DIAGNOSTIC CLASSIFICATION OF SCHIZOPHRENIA USING 3D CONVOLUTIONAL NEURAL NETWORK WITH RESTING-STATE FUNCTIONAL MRI
title_full_unstemmed S152. DIAGNOSTIC CLASSIFICATION OF SCHIZOPHRENIA USING 3D CONVOLUTIONAL NEURAL NETWORK WITH RESTING-STATE FUNCTIONAL MRI
title_short S152. DIAGNOSTIC CLASSIFICATION OF SCHIZOPHRENIA USING 3D CONVOLUTIONAL NEURAL NETWORK WITH RESTING-STATE FUNCTIONAL MRI
title_sort s152. diagnostic classification of schizophrenia using 3d convolutional neural network with resting-state functional mri
topic Poster Session I
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7234740/
http://dx.doi.org/10.1093/schbul/sbaa031.218
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