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Prediction and analysis of key protein structures of 2019-nCoV

Aim: The purpose of this study was to predict and analyze the structure and function of 2019-novel Coronavirus (nCoV) key proteins. Materials & methods: We obtained the structure and sequence of proteins from related databases and studied them through multiple sequence alignment, homology modeli...

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Detalles Bibliográficos
Autores principales: Li, Qihao, Peng, Wen, Ou, Yu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Future Medicine Ltd 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7236793/
http://dx.doi.org/10.2217/fvl-2020-0020
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author Li, Qihao
Peng, Wen
Ou, Yu
author_facet Li, Qihao
Peng, Wen
Ou, Yu
author_sort Li, Qihao
collection PubMed
description Aim: The purpose of this study was to predict and analyze the structure and function of 2019-novel Coronavirus (nCoV) key proteins. Materials & methods: We obtained the structure and sequence of proteins from related databases and studied them through multiple sequence alignment, homology modeling, sequence analysis, virtual screening, reverse mutation, protein structure overlap and surface property analysis. Results & conclusion: We found no significant changes in envelope protein, membrane protein, nucleocapsid protein and key proteases in open reading frame 1ab, and predicted results of proteins and performed molecular dynamics simulations. Based on the surface properties of spike protein and docking results with angiotensin-converting enzyme 2, we believe that the binding ability of spike protein to angiotensin-converting enzyme 2 may be similar to SARS. These studies will help us in fighting 2019-nCoV.
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spelling pubmed-72367932020-05-19 Prediction and analysis of key protein structures of 2019-nCoV Li, Qihao Peng, Wen Ou, Yu Future Virol Short Communication Aim: The purpose of this study was to predict and analyze the structure and function of 2019-novel Coronavirus (nCoV) key proteins. Materials & methods: We obtained the structure and sequence of proteins from related databases and studied them through multiple sequence alignment, homology modeling, sequence analysis, virtual screening, reverse mutation, protein structure overlap and surface property analysis. Results & conclusion: We found no significant changes in envelope protein, membrane protein, nucleocapsid protein and key proteases in open reading frame 1ab, and predicted results of proteins and performed molecular dynamics simulations. Based on the surface properties of spike protein and docking results with angiotensin-converting enzyme 2, we believe that the binding ability of spike protein to angiotensin-converting enzyme 2 may be similar to SARS. These studies will help us in fighting 2019-nCoV. Future Medicine Ltd 2020-05-12 2020-04 /pmc/articles/PMC7236793/ http://dx.doi.org/10.2217/fvl-2020-0020 Text en © 2020 Future Medicine Ltd This work is licensed under the Creative Commons Attribution 4.0 License (http://creativecommons.org/licenses/by/4.0/)
spellingShingle Short Communication
Li, Qihao
Peng, Wen
Ou, Yu
Prediction and analysis of key protein structures of 2019-nCoV
title Prediction and analysis of key protein structures of 2019-nCoV
title_full Prediction and analysis of key protein structures of 2019-nCoV
title_fullStr Prediction and analysis of key protein structures of 2019-nCoV
title_full_unstemmed Prediction and analysis of key protein structures of 2019-nCoV
title_short Prediction and analysis of key protein structures of 2019-nCoV
title_sort prediction and analysis of key protein structures of 2019-ncov
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7236793/
http://dx.doi.org/10.2217/fvl-2020-0020
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