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The aroma of TEMED as an activation and stabilizing signal for the antibacterial enzyme HEWL
The unpleasant smell released from dead bodies, may serve as an alarm for avoiding certain behaviour or as feeding or oviposition attractants for animals. However, little is known about their effect on the structure and function of proteins. Previously, we reported that using the aroma form of TEMED...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7236982/ https://www.ncbi.nlm.nih.gov/pubmed/32428017 http://dx.doi.org/10.1371/journal.pone.0232953 |
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author | Seraj, Zahra Ahmadian, Shahin Groves, Matthew R. Seyedarabi, Arefeh |
author_facet | Seraj, Zahra Ahmadian, Shahin Groves, Matthew R. Seyedarabi, Arefeh |
author_sort | Seraj, Zahra |
collection | PubMed |
description | The unpleasant smell released from dead bodies, may serve as an alarm for avoiding certain behaviour or as feeding or oviposition attractants for animals. However, little is known about their effect on the structure and function of proteins. Previously, we reported that using the aroma form of TEMED (a diamine), representative of the "smell of death", could completely inhibit the fibril formation of HEWL, as an antibacterial enzyme, and a model protein for fibrillation studies. To take this further, in this study we investigated the kinetics of TEMED using a number of techniques and in particular X-ray crystallography to identify the binding site(s) of TEMED and search for hotspot(s) necessary to inhibit fibril formation of HEWL. Structural data, coupled with other experimental data reported in this study, revealed that TEMED completely inhibited fibril formation and stabilized the structure of HEWL through enhancement of the CH-Π interaction and binding to an inhibitor hotspot comprised of residues Lys33, Phe34, Glu35 and Asn37 of HEWL. Additionally, results from this study showed that the binding of TEMED increased the activity and thermal stability of HEWL, helping to improve the function of this antibacterial enzyme. In conclusion, the role of the "smell of death”, as an important signal molecule affecting the activity and stability of HEWL was greatly highlighted, suggesting that aroma producing small molecules can be signals for structural and functional changes in proteins. |
format | Online Article Text |
id | pubmed-7236982 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-72369822020-06-03 The aroma of TEMED as an activation and stabilizing signal for the antibacterial enzyme HEWL Seraj, Zahra Ahmadian, Shahin Groves, Matthew R. Seyedarabi, Arefeh PLoS One Research Article The unpleasant smell released from dead bodies, may serve as an alarm for avoiding certain behaviour or as feeding or oviposition attractants for animals. However, little is known about their effect on the structure and function of proteins. Previously, we reported that using the aroma form of TEMED (a diamine), representative of the "smell of death", could completely inhibit the fibril formation of HEWL, as an antibacterial enzyme, and a model protein for fibrillation studies. To take this further, in this study we investigated the kinetics of TEMED using a number of techniques and in particular X-ray crystallography to identify the binding site(s) of TEMED and search for hotspot(s) necessary to inhibit fibril formation of HEWL. Structural data, coupled with other experimental data reported in this study, revealed that TEMED completely inhibited fibril formation and stabilized the structure of HEWL through enhancement of the CH-Π interaction and binding to an inhibitor hotspot comprised of residues Lys33, Phe34, Glu35 and Asn37 of HEWL. Additionally, results from this study showed that the binding of TEMED increased the activity and thermal stability of HEWL, helping to improve the function of this antibacterial enzyme. In conclusion, the role of the "smell of death”, as an important signal molecule affecting the activity and stability of HEWL was greatly highlighted, suggesting that aroma producing small molecules can be signals for structural and functional changes in proteins. Public Library of Science 2020-05-19 /pmc/articles/PMC7236982/ /pubmed/32428017 http://dx.doi.org/10.1371/journal.pone.0232953 Text en © 2020 Seraj et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Seraj, Zahra Ahmadian, Shahin Groves, Matthew R. Seyedarabi, Arefeh The aroma of TEMED as an activation and stabilizing signal for the antibacterial enzyme HEWL |
title | The aroma of TEMED as an activation and stabilizing signal for the antibacterial enzyme HEWL |
title_full | The aroma of TEMED as an activation and stabilizing signal for the antibacterial enzyme HEWL |
title_fullStr | The aroma of TEMED as an activation and stabilizing signal for the antibacterial enzyme HEWL |
title_full_unstemmed | The aroma of TEMED as an activation and stabilizing signal for the antibacterial enzyme HEWL |
title_short | The aroma of TEMED as an activation and stabilizing signal for the antibacterial enzyme HEWL |
title_sort | aroma of temed as an activation and stabilizing signal for the antibacterial enzyme hewl |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7236982/ https://www.ncbi.nlm.nih.gov/pubmed/32428017 http://dx.doi.org/10.1371/journal.pone.0232953 |
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