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The association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers
PURPOSE: Genetic studies have identified the association of some single-nucleotide polymorphisms (SNPs) with polypoidal choroidal vasculopathy (PCV), but little is known about whether these SNPs are related to PCV clinical features as well. We performed this study to examine the association of 12 SN...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7237508/ https://www.ncbi.nlm.nih.gov/pubmed/32328755 http://dx.doi.org/10.1007/s00417-020-04702-y |
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author | Luo, Mingyue Zhao, Xinyu Yang, Jingyuan Chen, Youxin |
author_facet | Luo, Mingyue Zhao, Xinyu Yang, Jingyuan Chen, Youxin |
author_sort | Luo, Mingyue |
collection | PubMed |
description | PURPOSE: Genetic studies have identified the association of some single-nucleotide polymorphisms (SNPs) with polypoidal choroidal vasculopathy (PCV), but little is known about whether these SNPs are related to PCV clinical features as well. We performed this study to examine the association of 12 SNPs with PCV clinical phenotypes. METHODS: Sixty-nine PCV eyes of 69 patients were included. Genomic DNA was extracted from peripheral blood. Agilent SureSelect Human ALL Exon V6 was used to sequence the 12 SNPs previously reported to associate with PCV. Baseline best-corrected visual acuity (BCVA), sub-foveal choroidal thickness (SFCT), choroid maximum vascular diameter (MVD), choroidal vascular hyperpermeability (CVH), and greatest linear dimension (GLD) of entire lesion were measured and compared between patients of different genotypes. Fisher’s exact test and Mann-Whitney U test were mainly used to compare categorical variables and continuous variables respectively. RESULTS: HTRA1 rs2293870 was a protective factor of PCV or AMD in the fellow eye (P = 0.040) and was related with greater SFCT in PCV eye after multiple linear regression (P = 0.043). C3 rs17030 was associated with smaller GLD (P = 0.033). CFH rs2274700 was related to lower MVD (P = 0.043) and was a protective factor for CVH (P = 0.034). CONCLUSION: Multiple PCV-associated SNPs are associated with PCV clinical phenotypes. The involvement of several synonymous SNPs calls for further research on the role of transcriptional alterations and trans-regulation of distant signaling pathways in PCV pathogenesis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00417-020-04702-y) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-7237508 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-72375082020-05-20 The association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers Luo, Mingyue Zhao, Xinyu Yang, Jingyuan Chen, Youxin Graefes Arch Clin Exp Ophthalmol Retinal Disorders PURPOSE: Genetic studies have identified the association of some single-nucleotide polymorphisms (SNPs) with polypoidal choroidal vasculopathy (PCV), but little is known about whether these SNPs are related to PCV clinical features as well. We performed this study to examine the association of 12 SNPs with PCV clinical phenotypes. METHODS: Sixty-nine PCV eyes of 69 patients were included. Genomic DNA was extracted from peripheral blood. Agilent SureSelect Human ALL Exon V6 was used to sequence the 12 SNPs previously reported to associate with PCV. Baseline best-corrected visual acuity (BCVA), sub-foveal choroidal thickness (SFCT), choroid maximum vascular diameter (MVD), choroidal vascular hyperpermeability (CVH), and greatest linear dimension (GLD) of entire lesion were measured and compared between patients of different genotypes. Fisher’s exact test and Mann-Whitney U test were mainly used to compare categorical variables and continuous variables respectively. RESULTS: HTRA1 rs2293870 was a protective factor of PCV or AMD in the fellow eye (P = 0.040) and was related with greater SFCT in PCV eye after multiple linear regression (P = 0.043). C3 rs17030 was associated with smaller GLD (P = 0.033). CFH rs2274700 was related to lower MVD (P = 0.043) and was a protective factor for CVH (P = 0.034). CONCLUSION: Multiple PCV-associated SNPs are associated with PCV clinical phenotypes. The involvement of several synonymous SNPs calls for further research on the role of transcriptional alterations and trans-regulation of distant signaling pathways in PCV pathogenesis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00417-020-04702-y) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2020-04-23 2020 /pmc/articles/PMC7237508/ /pubmed/32328755 http://dx.doi.org/10.1007/s00417-020-04702-y Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Retinal Disorders Luo, Mingyue Zhao, Xinyu Yang, Jingyuan Chen, Youxin The association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers |
title | The association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers |
title_full | The association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers |
title_fullStr | The association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers |
title_full_unstemmed | The association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers |
title_short | The association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers |
title_sort | association of polypoidal choroidal vasculopathy clinical phenotypes with previously reported genetic markers |
topic | Retinal Disorders |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7237508/ https://www.ncbi.nlm.nih.gov/pubmed/32328755 http://dx.doi.org/10.1007/s00417-020-04702-y |
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