Cargando…

Artificial intelligence may offer insight into factors determining individual TSH level

The factors that determine Serum Thyrotropin (TSH) levels have been examined through different methods, using different covariates. However, the use of machine learning methods has so far not been studied in population databases like NHANES (National Health and Nutritional Examination Survey) to pre...

Descripción completa

Detalles Bibliográficos
Autores principales: Santhanam, Prasanna, Nath, Tanmay, Mohammad, Faiz Khan, Ahima, Rexford S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7239447/
https://www.ncbi.nlm.nih.gov/pubmed/32433694
http://dx.doi.org/10.1371/journal.pone.0233336
_version_ 1783536691443662848
author Santhanam, Prasanna
Nath, Tanmay
Mohammad, Faiz Khan
Ahima, Rexford S.
author_facet Santhanam, Prasanna
Nath, Tanmay
Mohammad, Faiz Khan
Ahima, Rexford S.
author_sort Santhanam, Prasanna
collection PubMed
description The factors that determine Serum Thyrotropin (TSH) levels have been examined through different methods, using different covariates. However, the use of machine learning methods has so far not been studied in population databases like NHANES (National Health and Nutritional Examination Survey) to predict TSH. In this study, we performed a comparative analysis of different machine learning methods like Linear regression, Random forest, Support vector machine, multilayer perceptron and stacking regression to predict TSH and classify individuals with normal, low and high TSH levels. We considered Free T4, Anti-TPO antibodies, T3, Body Mass Index (BMI), Age and Ethnicity as the predictor variables. A total of 9818 subjects were included in this comparative analysis. We used coefficient of determination (r(2)) value to compare the results for predicting the TSH and show that the Random Forest, Gradient Boosting and Stacking Regression perform equally well in predicting TSH and achieve the highest r(2) value = 0.13, with mean absolute error of 0.78. Moreover, we found that Anti-TPO is the most important feature in predicting TSH followed by Age, BMI, T3 and Free-T4 for the regression analysis. While classifying TSH into normal, high or low levels, our comparative analysis also shows that Random forest performs the best in the classification study, performed with individuals with normal, high and low levels of TSH. We found the following Areas Under Curve (AUC); for low TSH, AUC = 0.61, normal TSH, AUC = 0.61 and elevated TSH AUC = 0.69. Additionally, we found that Anti-TPO was the most important feature in classifying TSH. In this study, we suggest that artificial intelligence and machine learning methods might offer an insight into the complex hypothalamic-pituitary -thyroid axis and may be an invaluable tool that guides us in making appropriate therapeutic decisions (thyroid hormone dosing) for the individual patient.
format Online
Article
Text
id pubmed-7239447
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-72394472020-06-08 Artificial intelligence may offer insight into factors determining individual TSH level Santhanam, Prasanna Nath, Tanmay Mohammad, Faiz Khan Ahima, Rexford S. PLoS One Research Article The factors that determine Serum Thyrotropin (TSH) levels have been examined through different methods, using different covariates. However, the use of machine learning methods has so far not been studied in population databases like NHANES (National Health and Nutritional Examination Survey) to predict TSH. In this study, we performed a comparative analysis of different machine learning methods like Linear regression, Random forest, Support vector machine, multilayer perceptron and stacking regression to predict TSH and classify individuals with normal, low and high TSH levels. We considered Free T4, Anti-TPO antibodies, T3, Body Mass Index (BMI), Age and Ethnicity as the predictor variables. A total of 9818 subjects were included in this comparative analysis. We used coefficient of determination (r(2)) value to compare the results for predicting the TSH and show that the Random Forest, Gradient Boosting and Stacking Regression perform equally well in predicting TSH and achieve the highest r(2) value = 0.13, with mean absolute error of 0.78. Moreover, we found that Anti-TPO is the most important feature in predicting TSH followed by Age, BMI, T3 and Free-T4 for the regression analysis. While classifying TSH into normal, high or low levels, our comparative analysis also shows that Random forest performs the best in the classification study, performed with individuals with normal, high and low levels of TSH. We found the following Areas Under Curve (AUC); for low TSH, AUC = 0.61, normal TSH, AUC = 0.61 and elevated TSH AUC = 0.69. Additionally, we found that Anti-TPO was the most important feature in classifying TSH. In this study, we suggest that artificial intelligence and machine learning methods might offer an insight into the complex hypothalamic-pituitary -thyroid axis and may be an invaluable tool that guides us in making appropriate therapeutic decisions (thyroid hormone dosing) for the individual patient. Public Library of Science 2020-05-20 /pmc/articles/PMC7239447/ /pubmed/32433694 http://dx.doi.org/10.1371/journal.pone.0233336 Text en © 2020 Santhanam et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Santhanam, Prasanna
Nath, Tanmay
Mohammad, Faiz Khan
Ahima, Rexford S.
Artificial intelligence may offer insight into factors determining individual TSH level
title Artificial intelligence may offer insight into factors determining individual TSH level
title_full Artificial intelligence may offer insight into factors determining individual TSH level
title_fullStr Artificial intelligence may offer insight into factors determining individual TSH level
title_full_unstemmed Artificial intelligence may offer insight into factors determining individual TSH level
title_short Artificial intelligence may offer insight into factors determining individual TSH level
title_sort artificial intelligence may offer insight into factors determining individual tsh level
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7239447/
https://www.ncbi.nlm.nih.gov/pubmed/32433694
http://dx.doi.org/10.1371/journal.pone.0233336
work_keys_str_mv AT santhanamprasanna artificialintelligencemayofferinsightintofactorsdeterminingindividualtshlevel
AT nathtanmay artificialintelligencemayofferinsightintofactorsdeterminingindividualtshlevel
AT mohammadfaizkhan artificialintelligencemayofferinsightintofactorsdeterminingindividualtshlevel
AT ahimarexfords artificialintelligencemayofferinsightintofactorsdeterminingindividualtshlevel