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Real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets

We developed and validated a deep-learning algorithm for polyp detection. We used a YOLOv2 to develop the algorithm for automatic polyp detection on 8,075 images (503 polyps). We validated the algorithm using three datasets: A: 1,338 images with 1,349 polyps; B: an open, public CVC-clinic database w...

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Autores principales: Lee, Ji Young, Jeong, Jinhoon, Song, Eun Mi, Ha, Chunae, Lee, Hyo Jeong, Koo, Ja Eun, Yang, Dong-Hoon, Kim, Namkug, Byeon, Jeong-Sik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7239848/
https://www.ncbi.nlm.nih.gov/pubmed/32433506
http://dx.doi.org/10.1038/s41598-020-65387-1
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author Lee, Ji Young
Jeong, Jinhoon
Song, Eun Mi
Ha, Chunae
Lee, Hyo Jeong
Koo, Ja Eun
Yang, Dong-Hoon
Kim, Namkug
Byeon, Jeong-Sik
author_facet Lee, Ji Young
Jeong, Jinhoon
Song, Eun Mi
Ha, Chunae
Lee, Hyo Jeong
Koo, Ja Eun
Yang, Dong-Hoon
Kim, Namkug
Byeon, Jeong-Sik
author_sort Lee, Ji Young
collection PubMed
description We developed and validated a deep-learning algorithm for polyp detection. We used a YOLOv2 to develop the algorithm for automatic polyp detection on 8,075 images (503 polyps). We validated the algorithm using three datasets: A: 1,338 images with 1,349 polyps; B: an open, public CVC-clinic database with 612 polyp images; and C: 7 colonoscopy videos with 26 polyps. To reduce the number of false positives in the video analysis, median filtering was applied. We tested the algorithm performance using 15 unaltered colonoscopy videos (dataset D). For datasets A and B, the per-image polyp detection sensitivity was 96.7% and 90.2%, respectively. For video study (dataset C), the per-image polyp detection sensitivity was 87.7%. False positive rates were 12.5% without a median filter and 6.3% with a median filter with a window size of 13. For dataset D, the sensitivity and false positive rate were 89.3% and 8.3%, respectively. The algorithm detected all 38 polyps that the endoscopists detected and 7 additional polyps. The operation speed was 67.16 frames per second. The automatic polyp detection algorithm exhibited good performance, as evidenced by the high detection sensitivity and rapid processing. Our algorithm may help endoscopists improve polyp detection.
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spelling pubmed-72398482020-05-29 Real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets Lee, Ji Young Jeong, Jinhoon Song, Eun Mi Ha, Chunae Lee, Hyo Jeong Koo, Ja Eun Yang, Dong-Hoon Kim, Namkug Byeon, Jeong-Sik Sci Rep Article We developed and validated a deep-learning algorithm for polyp detection. We used a YOLOv2 to develop the algorithm for automatic polyp detection on 8,075 images (503 polyps). We validated the algorithm using three datasets: A: 1,338 images with 1,349 polyps; B: an open, public CVC-clinic database with 612 polyp images; and C: 7 colonoscopy videos with 26 polyps. To reduce the number of false positives in the video analysis, median filtering was applied. We tested the algorithm performance using 15 unaltered colonoscopy videos (dataset D). For datasets A and B, the per-image polyp detection sensitivity was 96.7% and 90.2%, respectively. For video study (dataset C), the per-image polyp detection sensitivity was 87.7%. False positive rates were 12.5% without a median filter and 6.3% with a median filter with a window size of 13. For dataset D, the sensitivity and false positive rate were 89.3% and 8.3%, respectively. The algorithm detected all 38 polyps that the endoscopists detected and 7 additional polyps. The operation speed was 67.16 frames per second. The automatic polyp detection algorithm exhibited good performance, as evidenced by the high detection sensitivity and rapid processing. Our algorithm may help endoscopists improve polyp detection. Nature Publishing Group UK 2020-05-20 /pmc/articles/PMC7239848/ /pubmed/32433506 http://dx.doi.org/10.1038/s41598-020-65387-1 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lee, Ji Young
Jeong, Jinhoon
Song, Eun Mi
Ha, Chunae
Lee, Hyo Jeong
Koo, Ja Eun
Yang, Dong-Hoon
Kim, Namkug
Byeon, Jeong-Sik
Real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets
title Real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets
title_full Real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets
title_fullStr Real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets
title_full_unstemmed Real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets
title_short Real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets
title_sort real-time detection of colon polyps during colonoscopy using deep learning: systematic validation with four independent datasets
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7239848/
https://www.ncbi.nlm.nih.gov/pubmed/32433506
http://dx.doi.org/10.1038/s41598-020-65387-1
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