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Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation

Despite the importance of having robust estimates of the time-asymptotic total number of infections, early estimates of COVID-19 show enormous fluctuations. Using COVID-19 data from different countries, we show that predictions are extremely sensitive to the reporting protocol and crucially depend o...

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Autores principales: Faranda, Davide, Castillo, Isaac Pérez, Hulme, Oliver, Jezequel, Aglaé, Lamb, Jeroen S. W., Sato, Yuzuru, Thompson, Erica L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AIP Publishing LLC 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241685/
https://www.ncbi.nlm.nih.gov/pubmed/32491888
http://dx.doi.org/10.1063/5.0008834
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author Faranda, Davide
Castillo, Isaac Pérez
Hulme, Oliver
Jezequel, Aglaé
Lamb, Jeroen S. W.
Sato, Yuzuru
Thompson, Erica L.
author_facet Faranda, Davide
Castillo, Isaac Pérez
Hulme, Oliver
Jezequel, Aglaé
Lamb, Jeroen S. W.
Sato, Yuzuru
Thompson, Erica L.
author_sort Faranda, Davide
collection PubMed
description Despite the importance of having robust estimates of the time-asymptotic total number of infections, early estimates of COVID-19 show enormous fluctuations. Using COVID-19 data from different countries, we show that predictions are extremely sensitive to the reporting protocol and crucially depend on the last available data point before the maximum number of daily infections is reached. We propose a physical explanation for this sensitivity, using a susceptible–exposed–infected–recovered model, where the parameters are stochastically perturbed to simulate the difficulty in detecting patients, different confinement measures taken by different countries, as well as changes in the virus characteristics. Our results suggest that there are physical and statistical reasons to assign low confidence to statistical and dynamical fits, despite their apparently good statistical scores. These considerations are general and can be applied to other epidemics.
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spelling pubmed-72416852020-05-21 Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation Faranda, Davide Castillo, Isaac Pérez Hulme, Oliver Jezequel, Aglaé Lamb, Jeroen S. W. Sato, Yuzuru Thompson, Erica L. Chaos Fast Track Despite the importance of having robust estimates of the time-asymptotic total number of infections, early estimates of COVID-19 show enormous fluctuations. Using COVID-19 data from different countries, we show that predictions are extremely sensitive to the reporting protocol and crucially depend on the last available data point before the maximum number of daily infections is reached. We propose a physical explanation for this sensitivity, using a susceptible–exposed–infected–recovered model, where the parameters are stochastically perturbed to simulate the difficulty in detecting patients, different confinement measures taken by different countries, as well as changes in the virus characteristics. Our results suggest that there are physical and statistical reasons to assign low confidence to statistical and dynamical fits, despite their apparently good statistical scores. These considerations are general and can be applied to other epidemics. AIP Publishing LLC 2020-05 2020-05-19 /pmc/articles/PMC7241685/ /pubmed/32491888 http://dx.doi.org/10.1063/5.0008834 Text en © 2020 Author(s) 1054-1500/2020/30(5)/051107/10/$30.00 All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).
spellingShingle Fast Track
Faranda, Davide
Castillo, Isaac Pérez
Hulme, Oliver
Jezequel, Aglaé
Lamb, Jeroen S. W.
Sato, Yuzuru
Thompson, Erica L.
Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation
title Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation
title_full Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation
title_fullStr Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation
title_full_unstemmed Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation
title_short Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation
title_sort asymptotic estimates of sars-cov-2 infection counts and their sensitivity to stochastic perturbation
topic Fast Track
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241685/
https://www.ncbi.nlm.nih.gov/pubmed/32491888
http://dx.doi.org/10.1063/5.0008834
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