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Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation
Despite the importance of having robust estimates of the time-asymptotic total number of infections, early estimates of COVID-19 show enormous fluctuations. Using COVID-19 data from different countries, we show that predictions are extremely sensitive to the reporting protocol and crucially depend o...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
AIP Publishing LLC
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241685/ https://www.ncbi.nlm.nih.gov/pubmed/32491888 http://dx.doi.org/10.1063/5.0008834 |
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author | Faranda, Davide Castillo, Isaac Pérez Hulme, Oliver Jezequel, Aglaé Lamb, Jeroen S. W. Sato, Yuzuru Thompson, Erica L. |
author_facet | Faranda, Davide Castillo, Isaac Pérez Hulme, Oliver Jezequel, Aglaé Lamb, Jeroen S. W. Sato, Yuzuru Thompson, Erica L. |
author_sort | Faranda, Davide |
collection | PubMed |
description | Despite the importance of having robust estimates of the time-asymptotic total number of infections, early estimates of COVID-19 show enormous fluctuations. Using COVID-19 data from different countries, we show that predictions are extremely sensitive to the reporting protocol and crucially depend on the last available data point before the maximum number of daily infections is reached. We propose a physical explanation for this sensitivity, using a susceptible–exposed–infected–recovered model, where the parameters are stochastically perturbed to simulate the difficulty in detecting patients, different confinement measures taken by different countries, as well as changes in the virus characteristics. Our results suggest that there are physical and statistical reasons to assign low confidence to statistical and dynamical fits, despite their apparently good statistical scores. These considerations are general and can be applied to other epidemics. |
format | Online Article Text |
id | pubmed-7241685 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | AIP Publishing LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-72416852020-05-21 Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation Faranda, Davide Castillo, Isaac Pérez Hulme, Oliver Jezequel, Aglaé Lamb, Jeroen S. W. Sato, Yuzuru Thompson, Erica L. Chaos Fast Track Despite the importance of having robust estimates of the time-asymptotic total number of infections, early estimates of COVID-19 show enormous fluctuations. Using COVID-19 data from different countries, we show that predictions are extremely sensitive to the reporting protocol and crucially depend on the last available data point before the maximum number of daily infections is reached. We propose a physical explanation for this sensitivity, using a susceptible–exposed–infected–recovered model, where the parameters are stochastically perturbed to simulate the difficulty in detecting patients, different confinement measures taken by different countries, as well as changes in the virus characteristics. Our results suggest that there are physical and statistical reasons to assign low confidence to statistical and dynamical fits, despite their apparently good statistical scores. These considerations are general and can be applied to other epidemics. AIP Publishing LLC 2020-05 2020-05-19 /pmc/articles/PMC7241685/ /pubmed/32491888 http://dx.doi.org/10.1063/5.0008834 Text en © 2020 Author(s) 1054-1500/2020/30(5)/051107/10/$30.00 All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Fast Track Faranda, Davide Castillo, Isaac Pérez Hulme, Oliver Jezequel, Aglaé Lamb, Jeroen S. W. Sato, Yuzuru Thompson, Erica L. Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation |
title | Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation |
title_full | Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation |
title_fullStr | Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation |
title_full_unstemmed | Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation |
title_short | Asymptotic estimates of SARS-CoV-2 infection counts and their sensitivity to stochastic perturbation |
title_sort | asymptotic estimates of sars-cov-2 infection counts and their sensitivity to stochastic perturbation |
topic | Fast Track |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241685/ https://www.ncbi.nlm.nih.gov/pubmed/32491888 http://dx.doi.org/10.1063/5.0008834 |
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