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Variants in IL23R-C1orf141 and ADO-ZNF365-EGR2 are associated with susceptibility to Vogt-Koyanagi-Harada disease in Japanese population
Vogt-Koyanagi-Harada (VKH) disease is a systemic inflammatory disorder that affects pigment cell-containing organs such as the eye (e.g., chronic and/or recurrent granulomatous panuveitis). While the exact etiology and pathogenic mechanism of VKH disease are unclear, HLA-DR4 alleles have been docume...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241744/ https://www.ncbi.nlm.nih.gov/pubmed/32437414 http://dx.doi.org/10.1371/journal.pone.0233464 |
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author | Sakono, Takuto Meguro, Akira Takeuchi, Masaki Yamane, Takahiro Teshigawara, Takeshi Kitaichi, Nobuyoshi Horie, Yukihiro Namba, Kenichi Ohno, Shigeaki Nakao, Kumiko Sakamoto, Taiji Sakai, Tsutomu Nakano, Tadashi Keino, Hiroshi Okada, Annabelle A. Takeda, Atsunobu Ito, Takako Mashimo, Hisashi Ohguro, Nobuyuki Oono, Shinichirou Enaida, Hiroshi Okinami, Satoshi Horita, Nobuyuki Ota, Masao Mizuki, Nobuhisa |
author_facet | Sakono, Takuto Meguro, Akira Takeuchi, Masaki Yamane, Takahiro Teshigawara, Takeshi Kitaichi, Nobuyoshi Horie, Yukihiro Namba, Kenichi Ohno, Shigeaki Nakao, Kumiko Sakamoto, Taiji Sakai, Tsutomu Nakano, Tadashi Keino, Hiroshi Okada, Annabelle A. Takeda, Atsunobu Ito, Takako Mashimo, Hisashi Ohguro, Nobuyuki Oono, Shinichirou Enaida, Hiroshi Okinami, Satoshi Horita, Nobuyuki Ota, Masao Mizuki, Nobuhisa |
author_sort | Sakono, Takuto |
collection | PubMed |
description | Vogt-Koyanagi-Harada (VKH) disease is a systemic inflammatory disorder that affects pigment cell-containing organs such as the eye (e.g., chronic and/or recurrent granulomatous panuveitis). While the exact etiology and pathogenic mechanism of VKH disease are unclear, HLA-DR4 alleles have been documented to be strongly associated with VKH disease in various ethnic groups. Recently, a genome-wide association study (GWAS) found two new genetic risk factors (IL23R-C1orf141 and ADO-ZNF365-EGR2) in a non-HLA region from a Han Chinese population. In this study, we replicated these GWAS findings in a Japanese population. A total of 1,643 Japanese samples (380 cases with VKH disease and 1,263 healthy controls) were recruited. We assessed four single nucleotide polymorphisms (SNPs) shown in previous GWAS: rs78377598 and rs117633859 in IL23R-C1orf141, and rs442309 and rs224058 in ADO-ZNF365-EGR2. A significant allelic association with VKH disease was observed for all of the four SNPs (rs78377598: p(c) = 0.0057; rs117633859: p(c) = 0.0017; rs442309: p(c) = 0.021; rs224058: p(c) = 0.035). In genotypic association analysis, the minor alleles of IL23R-C1orf141 rs78377598 and rs117633859 had the strongest association with disease susceptibility under the additive model (p(c) = 0.0075 and p(c) = 0.0026, respectively). The minor alleles of ADO-ZNF365-EGR2 rs442309 and rs224058 were most strongly associated with disease susceptibility under the dominant model (p(c) = 0.00099 and p(c) = 0.0023, respectively). The meta-analysis of the current and previous studies found that all of the four SNPs exhibited a significantly strong association with VKH disease (meta-p < 0.00001: rs78377598, meta-odds ratio (OR) = 1.69; rs1176338, meta-OR = 1.82; rs442309, meta-OR = 1.34; rs224058, meta-OR = 1.33). In summary, our study replicated significant associations with VKH disease susceptibility reported in a previous GWAS. Thus, the IL23R-C1orf141 and ADO-ZNF365-EGR2 loci may play important roles in the development of VKH disease through genetic polymorphisms. |
format | Online Article Text |
id | pubmed-7241744 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-72417442020-06-03 Variants in IL23R-C1orf141 and ADO-ZNF365-EGR2 are associated with susceptibility to Vogt-Koyanagi-Harada disease in Japanese population Sakono, Takuto Meguro, Akira Takeuchi, Masaki Yamane, Takahiro Teshigawara, Takeshi Kitaichi, Nobuyoshi Horie, Yukihiro Namba, Kenichi Ohno, Shigeaki Nakao, Kumiko Sakamoto, Taiji Sakai, Tsutomu Nakano, Tadashi Keino, Hiroshi Okada, Annabelle A. Takeda, Atsunobu Ito, Takako Mashimo, Hisashi Ohguro, Nobuyuki Oono, Shinichirou Enaida, Hiroshi Okinami, Satoshi Horita, Nobuyuki Ota, Masao Mizuki, Nobuhisa PLoS One Research Article Vogt-Koyanagi-Harada (VKH) disease is a systemic inflammatory disorder that affects pigment cell-containing organs such as the eye (e.g., chronic and/or recurrent granulomatous panuveitis). While the exact etiology and pathogenic mechanism of VKH disease are unclear, HLA-DR4 alleles have been documented to be strongly associated with VKH disease in various ethnic groups. Recently, a genome-wide association study (GWAS) found two new genetic risk factors (IL23R-C1orf141 and ADO-ZNF365-EGR2) in a non-HLA region from a Han Chinese population. In this study, we replicated these GWAS findings in a Japanese population. A total of 1,643 Japanese samples (380 cases with VKH disease and 1,263 healthy controls) were recruited. We assessed four single nucleotide polymorphisms (SNPs) shown in previous GWAS: rs78377598 and rs117633859 in IL23R-C1orf141, and rs442309 and rs224058 in ADO-ZNF365-EGR2. A significant allelic association with VKH disease was observed for all of the four SNPs (rs78377598: p(c) = 0.0057; rs117633859: p(c) = 0.0017; rs442309: p(c) = 0.021; rs224058: p(c) = 0.035). In genotypic association analysis, the minor alleles of IL23R-C1orf141 rs78377598 and rs117633859 had the strongest association with disease susceptibility under the additive model (p(c) = 0.0075 and p(c) = 0.0026, respectively). The minor alleles of ADO-ZNF365-EGR2 rs442309 and rs224058 were most strongly associated with disease susceptibility under the dominant model (p(c) = 0.00099 and p(c) = 0.0023, respectively). The meta-analysis of the current and previous studies found that all of the four SNPs exhibited a significantly strong association with VKH disease (meta-p < 0.00001: rs78377598, meta-odds ratio (OR) = 1.69; rs1176338, meta-OR = 1.82; rs442309, meta-OR = 1.34; rs224058, meta-OR = 1.33). In summary, our study replicated significant associations with VKH disease susceptibility reported in a previous GWAS. Thus, the IL23R-C1orf141 and ADO-ZNF365-EGR2 loci may play important roles in the development of VKH disease through genetic polymorphisms. Public Library of Science 2020-05-21 /pmc/articles/PMC7241744/ /pubmed/32437414 http://dx.doi.org/10.1371/journal.pone.0233464 Text en © 2020 Sakono et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Sakono, Takuto Meguro, Akira Takeuchi, Masaki Yamane, Takahiro Teshigawara, Takeshi Kitaichi, Nobuyoshi Horie, Yukihiro Namba, Kenichi Ohno, Shigeaki Nakao, Kumiko Sakamoto, Taiji Sakai, Tsutomu Nakano, Tadashi Keino, Hiroshi Okada, Annabelle A. Takeda, Atsunobu Ito, Takako Mashimo, Hisashi Ohguro, Nobuyuki Oono, Shinichirou Enaida, Hiroshi Okinami, Satoshi Horita, Nobuyuki Ota, Masao Mizuki, Nobuhisa Variants in IL23R-C1orf141 and ADO-ZNF365-EGR2 are associated with susceptibility to Vogt-Koyanagi-Harada disease in Japanese population |
title | Variants in IL23R-C1orf141 and ADO-ZNF365-EGR2 are associated with susceptibility to Vogt-Koyanagi-Harada disease in Japanese population |
title_full | Variants in IL23R-C1orf141 and ADO-ZNF365-EGR2 are associated with susceptibility to Vogt-Koyanagi-Harada disease in Japanese population |
title_fullStr | Variants in IL23R-C1orf141 and ADO-ZNF365-EGR2 are associated with susceptibility to Vogt-Koyanagi-Harada disease in Japanese population |
title_full_unstemmed | Variants in IL23R-C1orf141 and ADO-ZNF365-EGR2 are associated with susceptibility to Vogt-Koyanagi-Harada disease in Japanese population |
title_short | Variants in IL23R-C1orf141 and ADO-ZNF365-EGR2 are associated with susceptibility to Vogt-Koyanagi-Harada disease in Japanese population |
title_sort | variants in il23r-c1orf141 and ado-znf365-egr2 are associated with susceptibility to vogt-koyanagi-harada disease in japanese population |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241744/ https://www.ncbi.nlm.nih.gov/pubmed/32437414 http://dx.doi.org/10.1371/journal.pone.0233464 |
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