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The value of CEP55 gene as a diagnostic biomarker and independent prognostic factor in LUAD and LUSC
OBJECTIVE: To investigate the value of CEP55 as a diagnostic marker and independent prognostic factor in lung adenocarcinoma (LUAD) and squamous cell carcinoma (LUSC), and to analyze its co-expression genes and related signaling pathways. METHODS: TCGA database and GEO database were used to analyze...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241791/ https://www.ncbi.nlm.nih.gov/pubmed/32437446 http://dx.doi.org/10.1371/journal.pone.0233283 |
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author | Fu, Linhai Wang, Haiyong Wei, Desheng Wang, Bin Zhang, Chu Zhu, Ting Ma, Zhifeng Li, Zhupeng Wu, Yuanlin Yu, Guangmao |
author_facet | Fu, Linhai Wang, Haiyong Wei, Desheng Wang, Bin Zhang, Chu Zhu, Ting Ma, Zhifeng Li, Zhupeng Wu, Yuanlin Yu, Guangmao |
author_sort | Fu, Linhai |
collection | PubMed |
description | OBJECTIVE: To investigate the value of CEP55 as a diagnostic marker and independent prognostic factor in lung adenocarcinoma (LUAD) and squamous cell carcinoma (LUSC), and to analyze its co-expression genes and related signaling pathways. METHODS: TCGA database and GEO database were used to analyze the expression of CEP55 in LUAD and LUSC compared with normal tissues. The co-expression genes of CEP55 in LUAD and LUSC were excavated by cBioPortal and enriched by KEGG and GO. Establishing Receiver operating characteristic (ROC) curve to evaluate the value of CEP55 as a diagnostic and prognostic factor. The association between CEP55 expression and the clinicopathological features was evaluated using χ2 tests. ROC curves for diagnosis and prognosis detection were constructed. Prognostic values were analyzed by univariate and multivariate Cox regression models. RESULTS: Compared with normal lung tissues, CEP55 expression was significantly upregulated in both LUAD and LUSC. ROC curve analysis showed that CEP55 could be used as an effective diagnostic target for LUAD (AUC = 0.969) and LUSC (AUC = 0.994). When CEP55 gene was selected as an independent prognostic factor, high expression of CEP55 was more disadvantageous to OS and RFS of LUAD patients (P<0.05), but no significant difference was found in LUSC patients (P>0.05). The number of co-expression genes of CEP55 in LUAD is more than that in LUSC, and is related to cell cycle, DNA replication and P53 signaling pathway. CONCLUSION: CEP55 can be used as a diagnostic marker for LUAD and LUSC, but only as an independent prognostic factor for LUAD rather than LUSC. |
format | Online Article Text |
id | pubmed-7241791 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-72417912020-06-03 The value of CEP55 gene as a diagnostic biomarker and independent prognostic factor in LUAD and LUSC Fu, Linhai Wang, Haiyong Wei, Desheng Wang, Bin Zhang, Chu Zhu, Ting Ma, Zhifeng Li, Zhupeng Wu, Yuanlin Yu, Guangmao PLoS One Research Article OBJECTIVE: To investigate the value of CEP55 as a diagnostic marker and independent prognostic factor in lung adenocarcinoma (LUAD) and squamous cell carcinoma (LUSC), and to analyze its co-expression genes and related signaling pathways. METHODS: TCGA database and GEO database were used to analyze the expression of CEP55 in LUAD and LUSC compared with normal tissues. The co-expression genes of CEP55 in LUAD and LUSC were excavated by cBioPortal and enriched by KEGG and GO. Establishing Receiver operating characteristic (ROC) curve to evaluate the value of CEP55 as a diagnostic and prognostic factor. The association between CEP55 expression and the clinicopathological features was evaluated using χ2 tests. ROC curves for diagnosis and prognosis detection were constructed. Prognostic values were analyzed by univariate and multivariate Cox regression models. RESULTS: Compared with normal lung tissues, CEP55 expression was significantly upregulated in both LUAD and LUSC. ROC curve analysis showed that CEP55 could be used as an effective diagnostic target for LUAD (AUC = 0.969) and LUSC (AUC = 0.994). When CEP55 gene was selected as an independent prognostic factor, high expression of CEP55 was more disadvantageous to OS and RFS of LUAD patients (P<0.05), but no significant difference was found in LUSC patients (P>0.05). The number of co-expression genes of CEP55 in LUAD is more than that in LUSC, and is related to cell cycle, DNA replication and P53 signaling pathway. CONCLUSION: CEP55 can be used as a diagnostic marker for LUAD and LUSC, but only as an independent prognostic factor for LUAD rather than LUSC. Public Library of Science 2020-05-21 /pmc/articles/PMC7241791/ /pubmed/32437446 http://dx.doi.org/10.1371/journal.pone.0233283 Text en © 2020 Fu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Fu, Linhai Wang, Haiyong Wei, Desheng Wang, Bin Zhang, Chu Zhu, Ting Ma, Zhifeng Li, Zhupeng Wu, Yuanlin Yu, Guangmao The value of CEP55 gene as a diagnostic biomarker and independent prognostic factor in LUAD and LUSC |
title | The value of CEP55 gene as a diagnostic biomarker and independent prognostic factor in LUAD and LUSC |
title_full | The value of CEP55 gene as a diagnostic biomarker and independent prognostic factor in LUAD and LUSC |
title_fullStr | The value of CEP55 gene as a diagnostic biomarker and independent prognostic factor in LUAD and LUSC |
title_full_unstemmed | The value of CEP55 gene as a diagnostic biomarker and independent prognostic factor in LUAD and LUSC |
title_short | The value of CEP55 gene as a diagnostic biomarker and independent prognostic factor in LUAD and LUSC |
title_sort | value of cep55 gene as a diagnostic biomarker and independent prognostic factor in luad and lusc |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241791/ https://www.ncbi.nlm.nih.gov/pubmed/32437446 http://dx.doi.org/10.1371/journal.pone.0233283 |
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