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Targeted next-generation sequencing identified novel mutations associated with hereditary anemias in Brazil

Hereditary anemias are a group of heterogeneous disorders including hemolytic anemias and hyporegenerative anemias, as congenital dyserythropoietic anemia (CDA). Causative mutations occur in a wide range of genes leading to deficiencies in red cell production, structure, or function. The genetic scr...

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Autores principales: Svidnicki, M. C. C. M., Zanetta, G. K., Congrains-Castillo, A., Costa, F. F., Saad, S. T. O.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241966/
https://www.ncbi.nlm.nih.gov/pubmed/32266426
http://dx.doi.org/10.1007/s00277-020-03986-8
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author Svidnicki, M. C. C. M.
Zanetta, G. K.
Congrains-Castillo, A.
Costa, F. F.
Saad, S. T. O.
author_facet Svidnicki, M. C. C. M.
Zanetta, G. K.
Congrains-Castillo, A.
Costa, F. F.
Saad, S. T. O.
author_sort Svidnicki, M. C. C. M.
collection PubMed
description Hereditary anemias are a group of heterogeneous disorders including hemolytic anemias and hyporegenerative anemias, as congenital dyserythropoietic anemia (CDA). Causative mutations occur in a wide range of genes leading to deficiencies in red cell production, structure, or function. The genetic screening of the main genes is important for timely diagnosis, since routine laboratory tests fail in a percentage of the cases, appropriate treatment decisions, and genetic counseling purposes. A conventional gene-by-gene sequencing approach is expensive and highly time-consuming, due to the genetic complexity of these diseases. To overcome this problem, we customized a targeted sequencing panel covering 35 genes previously associated to red cell disorders. We analyzed 36 patients, and potentially pathogenic variants were identified in 26 cases (72%). Twenty variants were novel. Remarkably, mutations in the SPTB gene (β-spectrin) were found in 34.6% of the patients with hereditary spherocytosis (HS), suggesting that SPTB is a major HS gene in the Southeast of Brazil. We also identified two cases with dominant HS presenting null mutations in trans with α-(LELY) in SPTA1 gene. This is the first comprehensive genetic analysis for hereditary anemias in the Brazilian population, contributing to a better understanding of the genetic basis and phenotypic consequences of these rare conditions in our population. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00277-020-03986-8) contains supplementary material, which is available to authorized users.
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spelling pubmed-72419662020-06-03 Targeted next-generation sequencing identified novel mutations associated with hereditary anemias in Brazil Svidnicki, M. C. C. M. Zanetta, G. K. Congrains-Castillo, A. Costa, F. F. Saad, S. T. O. Ann Hematol Original Article Hereditary anemias are a group of heterogeneous disorders including hemolytic anemias and hyporegenerative anemias, as congenital dyserythropoietic anemia (CDA). Causative mutations occur in a wide range of genes leading to deficiencies in red cell production, structure, or function. The genetic screening of the main genes is important for timely diagnosis, since routine laboratory tests fail in a percentage of the cases, appropriate treatment decisions, and genetic counseling purposes. A conventional gene-by-gene sequencing approach is expensive and highly time-consuming, due to the genetic complexity of these diseases. To overcome this problem, we customized a targeted sequencing panel covering 35 genes previously associated to red cell disorders. We analyzed 36 patients, and potentially pathogenic variants were identified in 26 cases (72%). Twenty variants were novel. Remarkably, mutations in the SPTB gene (β-spectrin) were found in 34.6% of the patients with hereditary spherocytosis (HS), suggesting that SPTB is a major HS gene in the Southeast of Brazil. We also identified two cases with dominant HS presenting null mutations in trans with α-(LELY) in SPTA1 gene. This is the first comprehensive genetic analysis for hereditary anemias in the Brazilian population, contributing to a better understanding of the genetic basis and phenotypic consequences of these rare conditions in our population. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00277-020-03986-8) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2020-03-23 2020 /pmc/articles/PMC7241966/ /pubmed/32266426 http://dx.doi.org/10.1007/s00277-020-03986-8 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Original Article
Svidnicki, M. C. C. M.
Zanetta, G. K.
Congrains-Castillo, A.
Costa, F. F.
Saad, S. T. O.
Targeted next-generation sequencing identified novel mutations associated with hereditary anemias in Brazil
title Targeted next-generation sequencing identified novel mutations associated with hereditary anemias in Brazil
title_full Targeted next-generation sequencing identified novel mutations associated with hereditary anemias in Brazil
title_fullStr Targeted next-generation sequencing identified novel mutations associated with hereditary anemias in Brazil
title_full_unstemmed Targeted next-generation sequencing identified novel mutations associated with hereditary anemias in Brazil
title_short Targeted next-generation sequencing identified novel mutations associated with hereditary anemias in Brazil
title_sort targeted next-generation sequencing identified novel mutations associated with hereditary anemias in brazil
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7241966/
https://www.ncbi.nlm.nih.gov/pubmed/32266426
http://dx.doi.org/10.1007/s00277-020-03986-8
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