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Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam

The presence of free-grazing ducks (FGD) has consistently been shown to be associated with highly pathogenic avian influenza virus (HPAIV) H5N1 outbreaks in South-East Asia. However, the lack of knowledge about the transmission pathways limits the effectiveness of control efforts. To address this ga...

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Autores principales: Willgert, Katriina, Meyer, Anne, Tung, Dinh Xuan, Thu, Nhu Van, Long, Pham Thanh, Newman, Scott, Thuy, Nguyen Thi Thanh, Padungtod, Pawin, Fournié, Guillaume, Pfeiffer, Dirk Udo, Vergne, Timothée
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7242457/
https://www.ncbi.nlm.nih.gov/pubmed/32439997
http://dx.doi.org/10.1038/s41598-020-65413-2
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author Willgert, Katriina
Meyer, Anne
Tung, Dinh Xuan
Thu, Nhu Van
Long, Pham Thanh
Newman, Scott
Thuy, Nguyen Thi Thanh
Padungtod, Pawin
Fournié, Guillaume
Pfeiffer, Dirk Udo
Vergne, Timothée
author_facet Willgert, Katriina
Meyer, Anne
Tung, Dinh Xuan
Thu, Nhu Van
Long, Pham Thanh
Newman, Scott
Thuy, Nguyen Thi Thanh
Padungtod, Pawin
Fournié, Guillaume
Pfeiffer, Dirk Udo
Vergne, Timothée
author_sort Willgert, Katriina
collection PubMed
description The presence of free-grazing ducks (FGD) has consistently been shown to be associated with highly pathogenic avian influenza virus (HPAIV) H5N1 outbreaks in South-East Asia. However, the lack of knowledge about the transmission pathways limits the effectiveness of control efforts. To address this gap, we developed a probabilistic transmission model of HPAIV H5N1 in the nomadic FGD production system in Viet Nam, assuming different scenarios to address parameter uncertainty. Results suggested that HPAIV H5N1 could spread within the nomadic FGD production system, with an estimated flock-level effective reproduction number (r(e)) ranging from 2.16 (95% confidence interval (CI): 1.39-3.49) to 6.10 (95%CI: 3.93-9.85) depending on the scenario. Indirect transmission via boats and trucks was shown to be the main transmission route in all scenarios. Results suggest that r(e) could be reduced below one with 95% confidence if 86% of FGD flocks were vaccinated in the best-case scenario or 95% in the worst-case scenario. If vaccination was combined with cleaning and disinfection of transport vehicles twice a week, vaccination coverage could be lowered to 60% in the best-case scenario. These findings are of particular relevance for prioritising interventions for effective control of HPAIV in nomadic free-grazing duck production systems.
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spelling pubmed-72424572020-05-30 Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam Willgert, Katriina Meyer, Anne Tung, Dinh Xuan Thu, Nhu Van Long, Pham Thanh Newman, Scott Thuy, Nguyen Thi Thanh Padungtod, Pawin Fournié, Guillaume Pfeiffer, Dirk Udo Vergne, Timothée Sci Rep Article The presence of free-grazing ducks (FGD) has consistently been shown to be associated with highly pathogenic avian influenza virus (HPAIV) H5N1 outbreaks in South-East Asia. However, the lack of knowledge about the transmission pathways limits the effectiveness of control efforts. To address this gap, we developed a probabilistic transmission model of HPAIV H5N1 in the nomadic FGD production system in Viet Nam, assuming different scenarios to address parameter uncertainty. Results suggested that HPAIV H5N1 could spread within the nomadic FGD production system, with an estimated flock-level effective reproduction number (r(e)) ranging from 2.16 (95% confidence interval (CI): 1.39-3.49) to 6.10 (95%CI: 3.93-9.85) depending on the scenario. Indirect transmission via boats and trucks was shown to be the main transmission route in all scenarios. Results suggest that r(e) could be reduced below one with 95% confidence if 86% of FGD flocks were vaccinated in the best-case scenario or 95% in the worst-case scenario. If vaccination was combined with cleaning and disinfection of transport vehicles twice a week, vaccination coverage could be lowered to 60% in the best-case scenario. These findings are of particular relevance for prioritising interventions for effective control of HPAIV in nomadic free-grazing duck production systems. Nature Publishing Group UK 2020-05-21 /pmc/articles/PMC7242457/ /pubmed/32439997 http://dx.doi.org/10.1038/s41598-020-65413-2 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Willgert, Katriina
Meyer, Anne
Tung, Dinh Xuan
Thu, Nhu Van
Long, Pham Thanh
Newman, Scott
Thuy, Nguyen Thi Thanh
Padungtod, Pawin
Fournié, Guillaume
Pfeiffer, Dirk Udo
Vergne, Timothée
Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam
title Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam
title_full Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam
title_fullStr Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam
title_full_unstemmed Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam
title_short Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam
title_sort transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in viet nam
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7242457/
https://www.ncbi.nlm.nih.gov/pubmed/32439997
http://dx.doi.org/10.1038/s41598-020-65413-2
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