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Clostridioides difficile ribotype distribution in a large teaching hospital in Serbia

BACKGROUND: The global epidemic of nosocomial diarrhea caused by Clostridioides (Clostridium) difficile started in 2000, with high mortality rates and emergence of a new hypervirulent strain NAP1/BI/027. The aim of this study was to assess the presence of ribotype 027 and other C. difficile ribotype...

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Autores principales: Korać, Miloš, Rupnik, Maja, Nikolić, Nataša, Jovanović, Milica, Tošić, Tanja, Malinić, Jovan, Mitrović, Nikola, Marković, Marko, Vujović, Ankica, Peruničić, Sanja, Bojović, Ksenija, Djordjević, Vladimir, Barać, Aleksandra, Milošević, Ivana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7243319/
https://www.ncbi.nlm.nih.gov/pubmed/32477428
http://dx.doi.org/10.1186/s13099-020-00364-7
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author Korać, Miloš
Rupnik, Maja
Nikolić, Nataša
Jovanović, Milica
Tošić, Tanja
Malinić, Jovan
Mitrović, Nikola
Marković, Marko
Vujović, Ankica
Peruničić, Sanja
Bojović, Ksenija
Djordjević, Vladimir
Barać, Aleksandra
Milošević, Ivana
author_facet Korać, Miloš
Rupnik, Maja
Nikolić, Nataša
Jovanović, Milica
Tošić, Tanja
Malinić, Jovan
Mitrović, Nikola
Marković, Marko
Vujović, Ankica
Peruničić, Sanja
Bojović, Ksenija
Djordjević, Vladimir
Barać, Aleksandra
Milošević, Ivana
author_sort Korać, Miloš
collection PubMed
description BACKGROUND: The global epidemic of nosocomial diarrhea caused by Clostridioides (Clostridium) difficile started in 2000, with high mortality rates and emergence of a new hypervirulent strain NAP1/BI/027. The aim of this study was to assess the presence of ribotype 027 and other C. difficile ribotypes in a Serbian University Hospital, compare the temporal variability of ribotypes 3 years apart, as well as to compare clinical, demographic and laboratory characteristics and disease outcome among patients infected with 027 and non-027 ribotype. This was a prospective observational cohort study addressing 4-month intervals during 2014/2015 and 2017/2018. RESULTS: Ribotyping was performed in 64 non-duplicate C. difficile strains. Ribotype 027 was the most prevalent, and was detected in 53 (82.8%) patients (43/45 and 10/19 patients in 2014–2015 and 2017/2018, respectively). Other detected ribotypes were 001/072 in 4 (6.3%), 002 in 4 (6.3%), 014/020 in 2 (3.1%) and 176 in 1 (1.5%) patient. The percentage of the patients infected with ribotype 027 significantly decreased during the 3-year period, from 95.6 to 52.6% (p < 0.001). Ribotype 027 infection was associated with fluoroquinolone treatment more frequently than infection with other ribotypes [33 (62.3%) vs. 2 (18.2%), p = 0.010)]. A severe C. difficile infection was diagnosed more often in patients with the detected ribotype 027 compared to those infected with non-027 ribotypes (p = 0.006). No significant difference in the mortality and recurrence rates was found between the patients infected with ribotype 027 and those infected with other ribotypes [10/53 (18.8%) vs. 2/11 (18.2%), p = 0.708, and 10/35 (28.6%) vs. 0/2 (0%), p = 1.000, respectively]. CONCLUSION: Clostridium difficile ribotype 027 was the most prevalent ribotype among patients in a large Serbian hospital, but there is a clear decreasing trend.
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spelling pubmed-72433192020-05-29 Clostridioides difficile ribotype distribution in a large teaching hospital in Serbia Korać, Miloš Rupnik, Maja Nikolić, Nataša Jovanović, Milica Tošić, Tanja Malinić, Jovan Mitrović, Nikola Marković, Marko Vujović, Ankica Peruničić, Sanja Bojović, Ksenija Djordjević, Vladimir Barać, Aleksandra Milošević, Ivana Gut Pathog Research BACKGROUND: The global epidemic of nosocomial diarrhea caused by Clostridioides (Clostridium) difficile started in 2000, with high mortality rates and emergence of a new hypervirulent strain NAP1/BI/027. The aim of this study was to assess the presence of ribotype 027 and other C. difficile ribotypes in a Serbian University Hospital, compare the temporal variability of ribotypes 3 years apart, as well as to compare clinical, demographic and laboratory characteristics and disease outcome among patients infected with 027 and non-027 ribotype. This was a prospective observational cohort study addressing 4-month intervals during 2014/2015 and 2017/2018. RESULTS: Ribotyping was performed in 64 non-duplicate C. difficile strains. Ribotype 027 was the most prevalent, and was detected in 53 (82.8%) patients (43/45 and 10/19 patients in 2014–2015 and 2017/2018, respectively). Other detected ribotypes were 001/072 in 4 (6.3%), 002 in 4 (6.3%), 014/020 in 2 (3.1%) and 176 in 1 (1.5%) patient. The percentage of the patients infected with ribotype 027 significantly decreased during the 3-year period, from 95.6 to 52.6% (p < 0.001). Ribotype 027 infection was associated with fluoroquinolone treatment more frequently than infection with other ribotypes [33 (62.3%) vs. 2 (18.2%), p = 0.010)]. A severe C. difficile infection was diagnosed more often in patients with the detected ribotype 027 compared to those infected with non-027 ribotypes (p = 0.006). No significant difference in the mortality and recurrence rates was found between the patients infected with ribotype 027 and those infected with other ribotypes [10/53 (18.8%) vs. 2/11 (18.2%), p = 0.708, and 10/35 (28.6%) vs. 0/2 (0%), p = 1.000, respectively]. CONCLUSION: Clostridium difficile ribotype 027 was the most prevalent ribotype among patients in a large Serbian hospital, but there is a clear decreasing trend. BioMed Central 2020-05-22 /pmc/articles/PMC7243319/ /pubmed/32477428 http://dx.doi.org/10.1186/s13099-020-00364-7 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Research
Korać, Miloš
Rupnik, Maja
Nikolić, Nataša
Jovanović, Milica
Tošić, Tanja
Malinić, Jovan
Mitrović, Nikola
Marković, Marko
Vujović, Ankica
Peruničić, Sanja
Bojović, Ksenija
Djordjević, Vladimir
Barać, Aleksandra
Milošević, Ivana
Clostridioides difficile ribotype distribution in a large teaching hospital in Serbia
title Clostridioides difficile ribotype distribution in a large teaching hospital in Serbia
title_full Clostridioides difficile ribotype distribution in a large teaching hospital in Serbia
title_fullStr Clostridioides difficile ribotype distribution in a large teaching hospital in Serbia
title_full_unstemmed Clostridioides difficile ribotype distribution in a large teaching hospital in Serbia
title_short Clostridioides difficile ribotype distribution in a large teaching hospital in Serbia
title_sort clostridioides difficile ribotype distribution in a large teaching hospital in serbia
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7243319/
https://www.ncbi.nlm.nih.gov/pubmed/32477428
http://dx.doi.org/10.1186/s13099-020-00364-7
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