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Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis

Colorectal cancer (CRC) represents one of the most common malignancies with high morbidity worldwide. RNA methylation (m6A) has been considered to tremendously contribute to cancer initiation and progression since its first discovery. In this study, we comprehensively analyzed associations between m...

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Detalles Bibliográficos
Autores principales: Ji, Liechen, Chen, Shuo, Gu, Liqiang, Zhang, Xipeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7243737/
https://www.ncbi.nlm.nih.gov/pubmed/32500031
http://dx.doi.org/10.3389/fonc.2020.00768
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author Ji, Liechen
Chen, Shuo
Gu, Liqiang
Zhang, Xipeng
author_facet Ji, Liechen
Chen, Shuo
Gu, Liqiang
Zhang, Xipeng
author_sort Ji, Liechen
collection PubMed
description Colorectal cancer (CRC) represents one of the most common malignancies with high morbidity worldwide. RNA methylation (m6A) has been considered to tremendously contribute to cancer initiation and progression since its first discovery. In this study, we comprehensively analyzed associations between mRNA expressions of m6A regulators and CRC tumor samples' epidemiologic information from the Cancer Genome Atlas (TCGA). Multivariate Cox proportional hazard model was applied to screening of m6A regulators whose mRNA expressions were significantly associated with CRC tumor samples' overall survival (OS) probability and those significant regulators were used for LASSO regression analysis to construct CRC prognosis prediction signature. As a result, two regulators i.e., YTHDC2 and ALKBH5 were picked out in multivariate analysis. CRC prognosis signature was constructed based on those two regulators through which CRC tumor samples with favorable and inferior prognosis could definitely be distinguished independent of potential confounding factors. This study should be helpful for identifying prognostic different CRC patients and guiding therapeutic method selection.
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spelling pubmed-72437372020-06-03 Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis Ji, Liechen Chen, Shuo Gu, Liqiang Zhang, Xipeng Front Oncol Oncology Colorectal cancer (CRC) represents one of the most common malignancies with high morbidity worldwide. RNA methylation (m6A) has been considered to tremendously contribute to cancer initiation and progression since its first discovery. In this study, we comprehensively analyzed associations between mRNA expressions of m6A regulators and CRC tumor samples' epidemiologic information from the Cancer Genome Atlas (TCGA). Multivariate Cox proportional hazard model was applied to screening of m6A regulators whose mRNA expressions were significantly associated with CRC tumor samples' overall survival (OS) probability and those significant regulators were used for LASSO regression analysis to construct CRC prognosis prediction signature. As a result, two regulators i.e., YTHDC2 and ALKBH5 were picked out in multivariate analysis. CRC prognosis signature was constructed based on those two regulators through which CRC tumor samples with favorable and inferior prognosis could definitely be distinguished independent of potential confounding factors. This study should be helpful for identifying prognostic different CRC patients and guiding therapeutic method selection. Frontiers Media S.A. 2020-05-15 /pmc/articles/PMC7243737/ /pubmed/32500031 http://dx.doi.org/10.3389/fonc.2020.00768 Text en Copyright © 2020 Ji, Chen, Gu and Zhang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Ji, Liechen
Chen, Shuo
Gu, Liqiang
Zhang, Xipeng
Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis
title Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis
title_full Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis
title_fullStr Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis
title_full_unstemmed Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis
title_short Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis
title_sort exploration of potential roles of m6a regulators in colorectal cancer prognosis
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7243737/
https://www.ncbi.nlm.nih.gov/pubmed/32500031
http://dx.doi.org/10.3389/fonc.2020.00768
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