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Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis
Colorectal cancer (CRC) represents one of the most common malignancies with high morbidity worldwide. RNA methylation (m6A) has been considered to tremendously contribute to cancer initiation and progression since its first discovery. In this study, we comprehensively analyzed associations between m...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7243737/ https://www.ncbi.nlm.nih.gov/pubmed/32500031 http://dx.doi.org/10.3389/fonc.2020.00768 |
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author | Ji, Liechen Chen, Shuo Gu, Liqiang Zhang, Xipeng |
author_facet | Ji, Liechen Chen, Shuo Gu, Liqiang Zhang, Xipeng |
author_sort | Ji, Liechen |
collection | PubMed |
description | Colorectal cancer (CRC) represents one of the most common malignancies with high morbidity worldwide. RNA methylation (m6A) has been considered to tremendously contribute to cancer initiation and progression since its first discovery. In this study, we comprehensively analyzed associations between mRNA expressions of m6A regulators and CRC tumor samples' epidemiologic information from the Cancer Genome Atlas (TCGA). Multivariate Cox proportional hazard model was applied to screening of m6A regulators whose mRNA expressions were significantly associated with CRC tumor samples' overall survival (OS) probability and those significant regulators were used for LASSO regression analysis to construct CRC prognosis prediction signature. As a result, two regulators i.e., YTHDC2 and ALKBH5 were picked out in multivariate analysis. CRC prognosis signature was constructed based on those two regulators through which CRC tumor samples with favorable and inferior prognosis could definitely be distinguished independent of potential confounding factors. This study should be helpful for identifying prognostic different CRC patients and guiding therapeutic method selection. |
format | Online Article Text |
id | pubmed-7243737 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72437372020-06-03 Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis Ji, Liechen Chen, Shuo Gu, Liqiang Zhang, Xipeng Front Oncol Oncology Colorectal cancer (CRC) represents one of the most common malignancies with high morbidity worldwide. RNA methylation (m6A) has been considered to tremendously contribute to cancer initiation and progression since its first discovery. In this study, we comprehensively analyzed associations between mRNA expressions of m6A regulators and CRC tumor samples' epidemiologic information from the Cancer Genome Atlas (TCGA). Multivariate Cox proportional hazard model was applied to screening of m6A regulators whose mRNA expressions were significantly associated with CRC tumor samples' overall survival (OS) probability and those significant regulators were used for LASSO regression analysis to construct CRC prognosis prediction signature. As a result, two regulators i.e., YTHDC2 and ALKBH5 were picked out in multivariate analysis. CRC prognosis signature was constructed based on those two regulators through which CRC tumor samples with favorable and inferior prognosis could definitely be distinguished independent of potential confounding factors. This study should be helpful for identifying prognostic different CRC patients and guiding therapeutic method selection. Frontiers Media S.A. 2020-05-15 /pmc/articles/PMC7243737/ /pubmed/32500031 http://dx.doi.org/10.3389/fonc.2020.00768 Text en Copyright © 2020 Ji, Chen, Gu and Zhang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Ji, Liechen Chen, Shuo Gu, Liqiang Zhang, Xipeng Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis |
title | Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis |
title_full | Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis |
title_fullStr | Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis |
title_full_unstemmed | Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis |
title_short | Exploration of Potential Roles of m6A Regulators in Colorectal Cancer Prognosis |
title_sort | exploration of potential roles of m6a regulators in colorectal cancer prognosis |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7243737/ https://www.ncbi.nlm.nih.gov/pubmed/32500031 http://dx.doi.org/10.3389/fonc.2020.00768 |
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