Cargando…

Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma

Since angiogenesis has an indispensable effect in the development and progression of tumors, in this study we aimed to identify angiogenic genes closely associated with prognosis of HCC to establish diagnostic, prognostic, and recurrence models. We analyzed 132 angiogenic genes and HCC-related RNA s...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhu, Jinyu, Tang, Bufu, Li, Jie, Shi, Yueli, Chen, Minjiang, Lv, Xiuling, Meng, Miaomiao, Weng, Qiaoyou, Zhang, Nannan, Fan, Kai, Xu, Min, Ji, Jiansong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7244068/
https://www.ncbi.nlm.nih.gov/pubmed/32379058
http://dx.doi.org/10.18632/aging.103107
_version_ 1783537509130567680
author Zhu, Jinyu
Tang, Bufu
Li, Jie
Shi, Yueli
Chen, Minjiang
Lv, Xiuling
Meng, Miaomiao
Weng, Qiaoyou
Zhang, Nannan
Fan, Kai
Xu, Min
Ji, Jiansong
author_facet Zhu, Jinyu
Tang, Bufu
Li, Jie
Shi, Yueli
Chen, Minjiang
Lv, Xiuling
Meng, Miaomiao
Weng, Qiaoyou
Zhang, Nannan
Fan, Kai
Xu, Min
Ji, Jiansong
author_sort Zhu, Jinyu
collection PubMed
description Since angiogenesis has an indispensable effect in the development and progression of tumors, in this study we aimed to identify angiogenic genes closely associated with prognosis of HCC to establish diagnostic, prognostic, and recurrence models. We analyzed 132 angiogenic genes and HCC-related RNA sequence data from the TCGA and ICGC databases by Cox and least absolute shrinkage and selection operator (LASSO) regression, and identified four angiogenic genes (ENFA3, EGF, MMP3 and AURKB) to establish prognosis, recurrence and diagnostic models and corresponding nomograms. The prognostic and recurrence models were determined to be independent predictors of prognosis and recurrence (P < 0.05). And compared with the low-risk group, patients in the high-risk group had worse overall survival (OS) rates in training cohort (P < 0.001) and validation cohort (P < 0.001), and higher recurrence rates in training cohort (P<0.001) and validation cohort (P=0.01). The diagnostic models have been validated to correctly distinguish HCC from normal samples and proliferative nodule samples. Through pharmacological analysis we identified piperlongumine as a drug for targeting angiogenesis, and it was validated to inhibit HCC cell proliferation and angiogenesis via the EGF/EGFR axis.
format Online
Article
Text
id pubmed-7244068
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Impact Journals
record_format MEDLINE/PubMed
spelling pubmed-72440682020-06-03 Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma Zhu, Jinyu Tang, Bufu Li, Jie Shi, Yueli Chen, Minjiang Lv, Xiuling Meng, Miaomiao Weng, Qiaoyou Zhang, Nannan Fan, Kai Xu, Min Ji, Jiansong Aging (Albany NY) Research Paper Since angiogenesis has an indispensable effect in the development and progression of tumors, in this study we aimed to identify angiogenic genes closely associated with prognosis of HCC to establish diagnostic, prognostic, and recurrence models. We analyzed 132 angiogenic genes and HCC-related RNA sequence data from the TCGA and ICGC databases by Cox and least absolute shrinkage and selection operator (LASSO) regression, and identified four angiogenic genes (ENFA3, EGF, MMP3 and AURKB) to establish prognosis, recurrence and diagnostic models and corresponding nomograms. The prognostic and recurrence models were determined to be independent predictors of prognosis and recurrence (P < 0.05). And compared with the low-risk group, patients in the high-risk group had worse overall survival (OS) rates in training cohort (P < 0.001) and validation cohort (P < 0.001), and higher recurrence rates in training cohort (P<0.001) and validation cohort (P=0.01). The diagnostic models have been validated to correctly distinguish HCC from normal samples and proliferative nodule samples. Through pharmacological analysis we identified piperlongumine as a drug for targeting angiogenesis, and it was validated to inhibit HCC cell proliferation and angiogenesis via the EGF/EGFR axis. Impact Journals 2020-05-06 /pmc/articles/PMC7244068/ /pubmed/32379058 http://dx.doi.org/10.18632/aging.103107 Text en Copyright © 2020 Zhu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Zhu, Jinyu
Tang, Bufu
Li, Jie
Shi, Yueli
Chen, Minjiang
Lv, Xiuling
Meng, Miaomiao
Weng, Qiaoyou
Zhang, Nannan
Fan, Kai
Xu, Min
Ji, Jiansong
Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma
title Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma
title_full Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma
title_fullStr Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma
title_full_unstemmed Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma
title_short Identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma
title_sort identification and validation of the angiogenic genes for constructing diagnostic, prognostic, and recurrence models for hepatocellular carcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7244068/
https://www.ncbi.nlm.nih.gov/pubmed/32379058
http://dx.doi.org/10.18632/aging.103107
work_keys_str_mv AT zhujinyu identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT tangbufu identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT lijie identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT shiyueli identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT chenminjiang identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT lvxiuling identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT mengmiaomiao identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT wengqiaoyou identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT zhangnannan identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT fankai identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT xumin identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma
AT jijiansong identificationandvalidationoftheangiogenicgenesforconstructingdiagnosticprognosticandrecurrencemodelsforhepatocellularcarcinoma