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Cryo-EM structures from sub-nl volumes using pin-printing and jet vitrification

The increasing demand for cryo-electron microscopy (cryo-EM) reveals drawbacks in current sample preparation protocols, such as sample waste and lack of reproducibility. Here, we present several technical developments that provide efficient sample preparation for cryo-EM studies. Pin printing substa...

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Autores principales: Ravelli, Raimond B. G., Nijpels, Frank J. T., Henderikx, Rene J. M., Weissenberger, Giulia, Thewessem, Sanne, Gijsbers, Abril, Beulen, Bart W. A. M. M., López-Iglesias, Carmen, Peters, Peter J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7244535/
https://www.ncbi.nlm.nih.gov/pubmed/32444637
http://dx.doi.org/10.1038/s41467-020-16392-5
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author Ravelli, Raimond B. G.
Nijpels, Frank J. T.
Henderikx, Rene J. M.
Weissenberger, Giulia
Thewessem, Sanne
Gijsbers, Abril
Beulen, Bart W. A. M. M.
López-Iglesias, Carmen
Peters, Peter J.
author_facet Ravelli, Raimond B. G.
Nijpels, Frank J. T.
Henderikx, Rene J. M.
Weissenberger, Giulia
Thewessem, Sanne
Gijsbers, Abril
Beulen, Bart W. A. M. M.
López-Iglesias, Carmen
Peters, Peter J.
author_sort Ravelli, Raimond B. G.
collection PubMed
description The increasing demand for cryo-electron microscopy (cryo-EM) reveals drawbacks in current sample preparation protocols, such as sample waste and lack of reproducibility. Here, we present several technical developments that provide efficient sample preparation for cryo-EM studies. Pin printing substantially reduces sample waste by depositing only a sub-nanoliter volume of sample on the carrier surface. Sample evaporation is mitigated by dewpoint control feedback loops. The deposited sample is vitrified by jets of cryogen followed by submersion into a cryogen bath. Because the cryogen jets cool the sample from the center, premounted autogrids can be used and loaded directly into automated cryo-EMs. We integrated these steps into a single device, named VitroJet. The device’s performance was validated by resolving four standard proteins (apoferritin, GroEL, worm hemoglobin, beta-galactosidase) to ~3 Å resolution using a 200-kV electron microscope. The VitroJet offers a promising solution for improved automated sample preparation in cryo-EM studies.
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spelling pubmed-72445352020-06-03 Cryo-EM structures from sub-nl volumes using pin-printing and jet vitrification Ravelli, Raimond B. G. Nijpels, Frank J. T. Henderikx, Rene J. M. Weissenberger, Giulia Thewessem, Sanne Gijsbers, Abril Beulen, Bart W. A. M. M. López-Iglesias, Carmen Peters, Peter J. Nat Commun Article The increasing demand for cryo-electron microscopy (cryo-EM) reveals drawbacks in current sample preparation protocols, such as sample waste and lack of reproducibility. Here, we present several technical developments that provide efficient sample preparation for cryo-EM studies. Pin printing substantially reduces sample waste by depositing only a sub-nanoliter volume of sample on the carrier surface. Sample evaporation is mitigated by dewpoint control feedback loops. The deposited sample is vitrified by jets of cryogen followed by submersion into a cryogen bath. Because the cryogen jets cool the sample from the center, premounted autogrids can be used and loaded directly into automated cryo-EMs. We integrated these steps into a single device, named VitroJet. The device’s performance was validated by resolving four standard proteins (apoferritin, GroEL, worm hemoglobin, beta-galactosidase) to ~3 Å resolution using a 200-kV electron microscope. The VitroJet offers a promising solution for improved automated sample preparation in cryo-EM studies. Nature Publishing Group UK 2020-05-22 /pmc/articles/PMC7244535/ /pubmed/32444637 http://dx.doi.org/10.1038/s41467-020-16392-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Ravelli, Raimond B. G.
Nijpels, Frank J. T.
Henderikx, Rene J. M.
Weissenberger, Giulia
Thewessem, Sanne
Gijsbers, Abril
Beulen, Bart W. A. M. M.
López-Iglesias, Carmen
Peters, Peter J.
Cryo-EM structures from sub-nl volumes using pin-printing and jet vitrification
title Cryo-EM structures from sub-nl volumes using pin-printing and jet vitrification
title_full Cryo-EM structures from sub-nl volumes using pin-printing and jet vitrification
title_fullStr Cryo-EM structures from sub-nl volumes using pin-printing and jet vitrification
title_full_unstemmed Cryo-EM structures from sub-nl volumes using pin-printing and jet vitrification
title_short Cryo-EM structures from sub-nl volumes using pin-printing and jet vitrification
title_sort cryo-em structures from sub-nl volumes using pin-printing and jet vitrification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7244535/
https://www.ncbi.nlm.nih.gov/pubmed/32444637
http://dx.doi.org/10.1038/s41467-020-16392-5
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