Cargando…
Potential energy landscape and thermodynamic transitions of coarse-grained protein models revealed by the multicanonical generalized hybrid Monte Carlo method
In the present study, thermodynamic properties of coarse-grained protein models have been studied by an extended ensemble method. Two types of protein model were analyzed; one is categorized into a fast folder and the other into a slow folder. Both models exhibit the following thermodynamic transiti...
Autores principales: | Mukuta, Natsuki, Miura, Shinichi |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Biophysical Society of Japan
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7246090/ https://www.ncbi.nlm.nih.gov/pubmed/32509490 http://dx.doi.org/10.2142/biophysico.BSJ-2019051 |
Ejemplares similares
-
Multicanonical cluster algorithm
por: Rummukainen, K.
Publicado: (1993) -
Monte Carlo, harmonic approximation, and coarse-graining approaches for enhanced sampling of biomolecular structure
por: Schlick, Tamar
Publicado: (2009) -
Thermodynamics of the Coarse-Graining Master Equation
por: Schaller, Gernot, et al.
Publicado: (2020) -
Adaptive coarse-grained Monte Carlo simulation of reaction and diffusion dynamics in heterogeneous plasma membranes
por: Collins, Stuart, et al.
Publicado: (2010) -
Enhanced Sampling of an Atomic Model with Hybrid Nonequilibrium
Molecular Dynamics—Monte Carlo Simulations Guided by a Coarse-Grained
Model
por: Chen, Yunjie, et al.
Publicado: (2015)