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Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer

BACKGROUND: Accumulated evidences indicate that long non‐coding RNAs (lncRNAs) participate in many biological mechanisms. Moreover, it acts as an essential regulator in various human diseases such as gastric cancer (GC). Nevertheless, the comprehensive regulatory roles and clinical significance of m...

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Autores principales: Zhu, Yinyin, Luo, Cong, Korakkandan, Arshad Ali, Fatma, Yislam Hadi Ahmed, Tao, Yang, Yi, Tianfei, Hu, Shiyun, Liao, Qi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7246363/
https://www.ncbi.nlm.nih.gov/pubmed/32011780
http://dx.doi.org/10.1002/jcla.23210
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author Zhu, Yinyin
Luo, Cong
Korakkandan, Arshad Ali
Fatma, Yislam Hadi Ahmed
Tao, Yang
Yi, Tianfei
Hu, Shiyun
Liao, Qi
author_facet Zhu, Yinyin
Luo, Cong
Korakkandan, Arshad Ali
Fatma, Yislam Hadi Ahmed
Tao, Yang
Yi, Tianfei
Hu, Shiyun
Liao, Qi
author_sort Zhu, Yinyin
collection PubMed
description BACKGROUND: Accumulated evidences indicate that long non‐coding RNAs (lncRNAs) participate in many biological mechanisms. Moreover, it acts as an essential regulator in various human diseases such as gastric cancer (GC). Nevertheless, the comprehensive regulatory roles and clinical significance of most lncRNAs in GC are not fully understood. METHODS: In this research, our aim was to investigate the underlying mechanism of lncRNA LINC01234 in GC. Firstly, the usage of qRT‐PCR helped to establish expression pattern of LINC01234 in GC tissues. Following this, appropriate statistical tests were applied to analyze the relation between expression level and clinicopathological factors. Ultimately, potential functions and regulatory network of LINC01234 were concluded via GSEA and a series of bioinformatics tools or databases, respectively. RESULTS: Consequently, at the end of research we found LINC01234 is up‐regulated in GC tissues in comparison with adjacent normal tissues. Furthermore, its expression level is correlated with differentiation of patients with GC. It is also important to highlight bioinformatics analysis revealed that LINC01234 is involved in cancer‐associated pathways such as cell cycle and mismatch repair. Also, regulatory network of LINC01234 presented a probability in the involvement of tumorigenesis through regulating cancer‐associated genes. CONCLUSION: Overall, our results suggested that LINC01234 may play a crucial role in GC.
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spelling pubmed-72463632020-06-01 Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer Zhu, Yinyin Luo, Cong Korakkandan, Arshad Ali Fatma, Yislam Hadi Ahmed Tao, Yang Yi, Tianfei Hu, Shiyun Liao, Qi J Clin Lab Anal Research Articles BACKGROUND: Accumulated evidences indicate that long non‐coding RNAs (lncRNAs) participate in many biological mechanisms. Moreover, it acts as an essential regulator in various human diseases such as gastric cancer (GC). Nevertheless, the comprehensive regulatory roles and clinical significance of most lncRNAs in GC are not fully understood. METHODS: In this research, our aim was to investigate the underlying mechanism of lncRNA LINC01234 in GC. Firstly, the usage of qRT‐PCR helped to establish expression pattern of LINC01234 in GC tissues. Following this, appropriate statistical tests were applied to analyze the relation between expression level and clinicopathological factors. Ultimately, potential functions and regulatory network of LINC01234 were concluded via GSEA and a series of bioinformatics tools or databases, respectively. RESULTS: Consequently, at the end of research we found LINC01234 is up‐regulated in GC tissues in comparison with adjacent normal tissues. Furthermore, its expression level is correlated with differentiation of patients with GC. It is also important to highlight bioinformatics analysis revealed that LINC01234 is involved in cancer‐associated pathways such as cell cycle and mismatch repair. Also, regulatory network of LINC01234 presented a probability in the involvement of tumorigenesis through regulating cancer‐associated genes. CONCLUSION: Overall, our results suggested that LINC01234 may play a crucial role in GC. John Wiley and Sons Inc. 2020-02-03 /pmc/articles/PMC7246363/ /pubmed/32011780 http://dx.doi.org/10.1002/jcla.23210 Text en © 2020 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Zhu, Yinyin
Luo, Cong
Korakkandan, Arshad Ali
Fatma, Yislam Hadi Ahmed
Tao, Yang
Yi, Tianfei
Hu, Shiyun
Liao, Qi
Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer
title Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer
title_full Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer
title_fullStr Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer
title_full_unstemmed Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer
title_short Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer
title_sort function and regulation annotation of up‐regulated long non‐coding rna linc01234 in gastric cancer
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7246363/
https://www.ncbi.nlm.nih.gov/pubmed/32011780
http://dx.doi.org/10.1002/jcla.23210
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