Cargando…
Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer
BACKGROUND: Accumulated evidences indicate that long non‐coding RNAs (lncRNAs) participate in many biological mechanisms. Moreover, it acts as an essential regulator in various human diseases such as gastric cancer (GC). Nevertheless, the comprehensive regulatory roles and clinical significance of m...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7246363/ https://www.ncbi.nlm.nih.gov/pubmed/32011780 http://dx.doi.org/10.1002/jcla.23210 |
_version_ | 1783537928717205504 |
---|---|
author | Zhu, Yinyin Luo, Cong Korakkandan, Arshad Ali Fatma, Yislam Hadi Ahmed Tao, Yang Yi, Tianfei Hu, Shiyun Liao, Qi |
author_facet | Zhu, Yinyin Luo, Cong Korakkandan, Arshad Ali Fatma, Yislam Hadi Ahmed Tao, Yang Yi, Tianfei Hu, Shiyun Liao, Qi |
author_sort | Zhu, Yinyin |
collection | PubMed |
description | BACKGROUND: Accumulated evidences indicate that long non‐coding RNAs (lncRNAs) participate in many biological mechanisms. Moreover, it acts as an essential regulator in various human diseases such as gastric cancer (GC). Nevertheless, the comprehensive regulatory roles and clinical significance of most lncRNAs in GC are not fully understood. METHODS: In this research, our aim was to investigate the underlying mechanism of lncRNA LINC01234 in GC. Firstly, the usage of qRT‐PCR helped to establish expression pattern of LINC01234 in GC tissues. Following this, appropriate statistical tests were applied to analyze the relation between expression level and clinicopathological factors. Ultimately, potential functions and regulatory network of LINC01234 were concluded via GSEA and a series of bioinformatics tools or databases, respectively. RESULTS: Consequently, at the end of research we found LINC01234 is up‐regulated in GC tissues in comparison with adjacent normal tissues. Furthermore, its expression level is correlated with differentiation of patients with GC. It is also important to highlight bioinformatics analysis revealed that LINC01234 is involved in cancer‐associated pathways such as cell cycle and mismatch repair. Also, regulatory network of LINC01234 presented a probability in the involvement of tumorigenesis through regulating cancer‐associated genes. CONCLUSION: Overall, our results suggested that LINC01234 may play a crucial role in GC. |
format | Online Article Text |
id | pubmed-7246363 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72463632020-06-01 Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer Zhu, Yinyin Luo, Cong Korakkandan, Arshad Ali Fatma, Yislam Hadi Ahmed Tao, Yang Yi, Tianfei Hu, Shiyun Liao, Qi J Clin Lab Anal Research Articles BACKGROUND: Accumulated evidences indicate that long non‐coding RNAs (lncRNAs) participate in many biological mechanisms. Moreover, it acts as an essential regulator in various human diseases such as gastric cancer (GC). Nevertheless, the comprehensive regulatory roles and clinical significance of most lncRNAs in GC are not fully understood. METHODS: In this research, our aim was to investigate the underlying mechanism of lncRNA LINC01234 in GC. Firstly, the usage of qRT‐PCR helped to establish expression pattern of LINC01234 in GC tissues. Following this, appropriate statistical tests were applied to analyze the relation between expression level and clinicopathological factors. Ultimately, potential functions and regulatory network of LINC01234 were concluded via GSEA and a series of bioinformatics tools or databases, respectively. RESULTS: Consequently, at the end of research we found LINC01234 is up‐regulated in GC tissues in comparison with adjacent normal tissues. Furthermore, its expression level is correlated with differentiation of patients with GC. It is also important to highlight bioinformatics analysis revealed that LINC01234 is involved in cancer‐associated pathways such as cell cycle and mismatch repair. Also, regulatory network of LINC01234 presented a probability in the involvement of tumorigenesis through regulating cancer‐associated genes. CONCLUSION: Overall, our results suggested that LINC01234 may play a crucial role in GC. John Wiley and Sons Inc. 2020-02-03 /pmc/articles/PMC7246363/ /pubmed/32011780 http://dx.doi.org/10.1002/jcla.23210 Text en © 2020 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals, Inc. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Zhu, Yinyin Luo, Cong Korakkandan, Arshad Ali Fatma, Yislam Hadi Ahmed Tao, Yang Yi, Tianfei Hu, Shiyun Liao, Qi Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer |
title | Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer |
title_full | Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer |
title_fullStr | Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer |
title_full_unstemmed | Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer |
title_short | Function and regulation annotation of up‐regulated long non‐coding RNA LINC01234 in gastric cancer |
title_sort | function and regulation annotation of up‐regulated long non‐coding rna linc01234 in gastric cancer |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7246363/ https://www.ncbi.nlm.nih.gov/pubmed/32011780 http://dx.doi.org/10.1002/jcla.23210 |
work_keys_str_mv | AT zhuyinyin functionandregulationannotationofupregulatedlongnoncodingrnalinc01234ingastriccancer AT luocong functionandregulationannotationofupregulatedlongnoncodingrnalinc01234ingastriccancer AT korakkandanarshadali functionandregulationannotationofupregulatedlongnoncodingrnalinc01234ingastriccancer AT fatmayislamhadiahmed functionandregulationannotationofupregulatedlongnoncodingrnalinc01234ingastriccancer AT taoyang functionandregulationannotationofupregulatedlongnoncodingrnalinc01234ingastriccancer AT yitianfei functionandregulationannotationofupregulatedlongnoncodingrnalinc01234ingastriccancer AT hushiyun functionandregulationannotationofupregulatedlongnoncodingrnalinc01234ingastriccancer AT liaoqi functionandregulationannotationofupregulatedlongnoncodingrnalinc01234ingastriccancer |