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Polysaccharide-Based Injection Matrix for Serial Crystallography

Serial crystallography (SX) provides an opportunity to observe the molecular dynamics of macromolecular structures at room temperature via pump-probe studies. The delivery of crystals embedded in a viscous medium via an injector or syringe is widely performed in synchrotrons or X-ray free-electron l...

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Autor principal: Nam, Ki Hyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7247560/
https://www.ncbi.nlm.nih.gov/pubmed/32397185
http://dx.doi.org/10.3390/ijms21093332
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author Nam, Ki Hyun
author_facet Nam, Ki Hyun
author_sort Nam, Ki Hyun
collection PubMed
description Serial crystallography (SX) provides an opportunity to observe the molecular dynamics of macromolecular structures at room temperature via pump-probe studies. The delivery of crystals embedded in a viscous medium via an injector or syringe is widely performed in synchrotrons or X-ray free-electron laser facilities with low repetition rates. Various viscous media have been developed; however, there are cases in which the delivery material undesirably interacts chemically or biologically with specific protein samples, or changes the stability of the injection stream, depending on the crystallization solution. Therefore, continued discovery and characterization of new delivery media is necessary for expanding future SX applications. Here, the preparation and characterization of new polysaccharide (wheat starch (WS) and alginate)-based sample delivery media are introduced for SX. Crystals embedded in a WS or alginate injection medium showed a stable injection stream at a flow rate of < 200 nL/min and low-level X-ray background scattering similar to other hydrogels. Using these media, serial millisecond crystallography (SMX) was performed, and the room temperature crystal structures of glucose isomerase and lysozyme were determined at 1.9–2.0 Å resolutions. WS and alginate will allow an expanded application of sample delivery media in SX experiments.
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spelling pubmed-72475602020-06-10 Polysaccharide-Based Injection Matrix for Serial Crystallography Nam, Ki Hyun Int J Mol Sci Article Serial crystallography (SX) provides an opportunity to observe the molecular dynamics of macromolecular structures at room temperature via pump-probe studies. The delivery of crystals embedded in a viscous medium via an injector or syringe is widely performed in synchrotrons or X-ray free-electron laser facilities with low repetition rates. Various viscous media have been developed; however, there are cases in which the delivery material undesirably interacts chemically or biologically with specific protein samples, or changes the stability of the injection stream, depending on the crystallization solution. Therefore, continued discovery and characterization of new delivery media is necessary for expanding future SX applications. Here, the preparation and characterization of new polysaccharide (wheat starch (WS) and alginate)-based sample delivery media are introduced for SX. Crystals embedded in a WS or alginate injection medium showed a stable injection stream at a flow rate of < 200 nL/min and low-level X-ray background scattering similar to other hydrogels. Using these media, serial millisecond crystallography (SMX) was performed, and the room temperature crystal structures of glucose isomerase and lysozyme were determined at 1.9–2.0 Å resolutions. WS and alginate will allow an expanded application of sample delivery media in SX experiments. MDPI 2020-05-08 /pmc/articles/PMC7247560/ /pubmed/32397185 http://dx.doi.org/10.3390/ijms21093332 Text en © 2020 by the author. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Nam, Ki Hyun
Polysaccharide-Based Injection Matrix for Serial Crystallography
title Polysaccharide-Based Injection Matrix for Serial Crystallography
title_full Polysaccharide-Based Injection Matrix for Serial Crystallography
title_fullStr Polysaccharide-Based Injection Matrix for Serial Crystallography
title_full_unstemmed Polysaccharide-Based Injection Matrix for Serial Crystallography
title_short Polysaccharide-Based Injection Matrix for Serial Crystallography
title_sort polysaccharide-based injection matrix for serial crystallography
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7247560/
https://www.ncbi.nlm.nih.gov/pubmed/32397185
http://dx.doi.org/10.3390/ijms21093332
work_keys_str_mv AT namkihyun polysaccharidebasedinjectionmatrixforserialcrystallography