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Emergent Spaces for Coupled Oscillators

Systems of coupled dynamical units (e.g., oscillators or neurons) are known to exhibit complex, emergent behaviors that may be simplified through coarse-graining: a process in which one discovers coarse variables and derives equations for their evolution. Such coarse-graining procedures often requir...

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Autores principales: Thiem, Thomas N., Kooshkbaghi, Mahdi, Bertalan, Tom, Laing, Carlo R., Kevrekidis, Ioannis G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7247828/
https://www.ncbi.nlm.nih.gov/pubmed/32528268
http://dx.doi.org/10.3389/fncom.2020.00036
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author Thiem, Thomas N.
Kooshkbaghi, Mahdi
Bertalan, Tom
Laing, Carlo R.
Kevrekidis, Ioannis G.
author_facet Thiem, Thomas N.
Kooshkbaghi, Mahdi
Bertalan, Tom
Laing, Carlo R.
Kevrekidis, Ioannis G.
author_sort Thiem, Thomas N.
collection PubMed
description Systems of coupled dynamical units (e.g., oscillators or neurons) are known to exhibit complex, emergent behaviors that may be simplified through coarse-graining: a process in which one discovers coarse variables and derives equations for their evolution. Such coarse-graining procedures often require extensive experience and/or a deep understanding of the system dynamics. In this paper we present a systematic, data-driven approach to discovering “bespoke” coarse variables based on manifold learning algorithms. We illustrate this methodology with the classic Kuramoto phase oscillator model, and demonstrate how our manifold learning technique can successfully identify a coarse variable that is one-to-one with the established Kuramoto order parameter. We then introduce an extension of our coarse-graining methodology which enables us to learn evolution equations for the discovered coarse variables via an artificial neural network architecture templated on numerical time integrators (initial value solvers). This approach allows us to learn accurate approximations of time derivatives of state variables from sparse flow data, and hence discover useful approximate differential equation descriptions of their dynamic behavior. We demonstrate this capability by learning ODEs that agree with the known analytical expression for the Kuramoto order parameter dynamics at the continuum limit. We then show how this approach can also be used to learn the dynamics of coarse variables discovered through our manifold learning methodology. In both of these examples, we compare the results of our neural network based method to typical finite differences complemented with geometric harmonics. Finally, we present a series of computational examples illustrating how a variation of our manifold learning methodology can be used to discover sets of “effective” parameters, reduced parameter combinations, for multi-parameter models with complex coupling. We conclude with a discussion of possible extensions of this approach, including the possibility of obtaining data-driven effective partial differential equations for coarse-grained neuronal network behavior, as illustrated by the synchronization dynamics of Hodgkin–Huxley type neurons with a Chung-Lu network. Thus, we build an integrated suite of tools for obtaining data-driven coarse variables, data-driven effective parameters, and data-driven coarse-grained equations from detailed observations of networks of oscillators.
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spelling pubmed-72478282020-06-10 Emergent Spaces for Coupled Oscillators Thiem, Thomas N. Kooshkbaghi, Mahdi Bertalan, Tom Laing, Carlo R. Kevrekidis, Ioannis G. Front Comput Neurosci Neuroscience Systems of coupled dynamical units (e.g., oscillators or neurons) are known to exhibit complex, emergent behaviors that may be simplified through coarse-graining: a process in which one discovers coarse variables and derives equations for their evolution. Such coarse-graining procedures often require extensive experience and/or a deep understanding of the system dynamics. In this paper we present a systematic, data-driven approach to discovering “bespoke” coarse variables based on manifold learning algorithms. We illustrate this methodology with the classic Kuramoto phase oscillator model, and demonstrate how our manifold learning technique can successfully identify a coarse variable that is one-to-one with the established Kuramoto order parameter. We then introduce an extension of our coarse-graining methodology which enables us to learn evolution equations for the discovered coarse variables via an artificial neural network architecture templated on numerical time integrators (initial value solvers). This approach allows us to learn accurate approximations of time derivatives of state variables from sparse flow data, and hence discover useful approximate differential equation descriptions of their dynamic behavior. We demonstrate this capability by learning ODEs that agree with the known analytical expression for the Kuramoto order parameter dynamics at the continuum limit. We then show how this approach can also be used to learn the dynamics of coarse variables discovered through our manifold learning methodology. In both of these examples, we compare the results of our neural network based method to typical finite differences complemented with geometric harmonics. Finally, we present a series of computational examples illustrating how a variation of our manifold learning methodology can be used to discover sets of “effective” parameters, reduced parameter combinations, for multi-parameter models with complex coupling. We conclude with a discussion of possible extensions of this approach, including the possibility of obtaining data-driven effective partial differential equations for coarse-grained neuronal network behavior, as illustrated by the synchronization dynamics of Hodgkin–Huxley type neurons with a Chung-Lu network. Thus, we build an integrated suite of tools for obtaining data-driven coarse variables, data-driven effective parameters, and data-driven coarse-grained equations from detailed observations of networks of oscillators. Frontiers Media S.A. 2020-05-12 /pmc/articles/PMC7247828/ /pubmed/32528268 http://dx.doi.org/10.3389/fncom.2020.00036 Text en Copyright © 2020 Thiem, Kooshkbaghi, Bertalan, Laing and Kevrekidis. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Thiem, Thomas N.
Kooshkbaghi, Mahdi
Bertalan, Tom
Laing, Carlo R.
Kevrekidis, Ioannis G.
Emergent Spaces for Coupled Oscillators
title Emergent Spaces for Coupled Oscillators
title_full Emergent Spaces for Coupled Oscillators
title_fullStr Emergent Spaces for Coupled Oscillators
title_full_unstemmed Emergent Spaces for Coupled Oscillators
title_short Emergent Spaces for Coupled Oscillators
title_sort emergent spaces for coupled oscillators
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7247828/
https://www.ncbi.nlm.nih.gov/pubmed/32528268
http://dx.doi.org/10.3389/fncom.2020.00036
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