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Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid
This data can serve as a reference for other next-generation sequencing (NGS) of the cerebrospinal fluid (CSF). In the related research article, entitled “Next-Generation Sequencing of Cerebrospinal Fluid for the Diagnosis of Neurocysticercosis”, we reported NGS of the CSF might be an auxiliary meth...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7248648/ https://www.ncbi.nlm.nih.gov/pubmed/32478153 http://dx.doi.org/10.1016/j.dib.2020.105700 |
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author | Fei, Xiaofei Li, Chaoyang Zhang, Yun Zhang, Hongya Liu, Xuewu Ji, Xinchao Shi, Yajun Liu, Na Wu, Mengli Du, Fang Yang, Yining Dai, Wen Liu, TingTing He, Ying Bian, Ting Zhou, Huimin An, Xingyue Cai, Zheng Shi, Jian Feng, Guodong Shi, Ming Zhao, Gang |
author_facet | Fei, Xiaofei Li, Chaoyang Zhang, Yun Zhang, Hongya Liu, Xuewu Ji, Xinchao Shi, Yajun Liu, Na Wu, Mengli Du, Fang Yang, Yining Dai, Wen Liu, TingTing He, Ying Bian, Ting Zhou, Huimin An, Xingyue Cai, Zheng Shi, Jian Feng, Guodong Shi, Ming Zhao, Gang |
author_sort | Fei, Xiaofei |
collection | PubMed |
description | This data can serve as a reference for other next-generation sequencing (NGS) of the cerebrospinal fluid (CSF). In the related research article, entitled “Next-Generation Sequencing of Cerebrospinal Fluid for the Diagnosis of Neurocysticercosis”, we reported NGS of the CSF might be an auxiliary method for neurocysticercosis (NCC) patients who have complicated manifestations and courses to receive early diagnosis and treatment. In this article, we retrieved the available data about the sequencing statistics of the CSF samples and the number of unique reads and genomic coverage aligning to microorganic sequences. The data were generated by the Illumina MiniSeq system for sequencing and computational subtraction of the human host sequences was performed. Finally, the remaining sequencing data were aligned to the Microbial Genome Databases. This data can serve as a reference for other NGS of the CSF. |
format | Online Article Text |
id | pubmed-7248648 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-72486482020-05-29 Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid Fei, Xiaofei Li, Chaoyang Zhang, Yun Zhang, Hongya Liu, Xuewu Ji, Xinchao Shi, Yajun Liu, Na Wu, Mengli Du, Fang Yang, Yining Dai, Wen Liu, TingTing He, Ying Bian, Ting Zhou, Huimin An, Xingyue Cai, Zheng Shi, Jian Feng, Guodong Shi, Ming Zhao, Gang Data Brief Biochemistry, Genetics and Molecular Biology This data can serve as a reference for other next-generation sequencing (NGS) of the cerebrospinal fluid (CSF). In the related research article, entitled “Next-Generation Sequencing of Cerebrospinal Fluid for the Diagnosis of Neurocysticercosis”, we reported NGS of the CSF might be an auxiliary method for neurocysticercosis (NCC) patients who have complicated manifestations and courses to receive early diagnosis and treatment. In this article, we retrieved the available data about the sequencing statistics of the CSF samples and the number of unique reads and genomic coverage aligning to microorganic sequences. The data were generated by the Illumina MiniSeq system for sequencing and computational subtraction of the human host sequences was performed. Finally, the remaining sequencing data were aligned to the Microbial Genome Databases. This data can serve as a reference for other NGS of the CSF. Elsevier 2020-05-15 /pmc/articles/PMC7248648/ /pubmed/32478153 http://dx.doi.org/10.1016/j.dib.2020.105700 Text en © 2020 Published by Elsevier Inc. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Biochemistry, Genetics and Molecular Biology Fei, Xiaofei Li, Chaoyang Zhang, Yun Zhang, Hongya Liu, Xuewu Ji, Xinchao Shi, Yajun Liu, Na Wu, Mengli Du, Fang Yang, Yining Dai, Wen Liu, TingTing He, Ying Bian, Ting Zhou, Huimin An, Xingyue Cai, Zheng Shi, Jian Feng, Guodong Shi, Ming Zhao, Gang Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid |
title | Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid |
title_full | Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid |
title_fullStr | Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid |
title_full_unstemmed | Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid |
title_short | Data relating to sequencing statistics and the reads and genomic coverage aligning to Taenia solium in the cerebrospinal fluid |
title_sort | data relating to sequencing statistics and the reads and genomic coverage aligning to taenia solium in the cerebrospinal fluid |
topic | Biochemistry, Genetics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7248648/ https://www.ncbi.nlm.nih.gov/pubmed/32478153 http://dx.doi.org/10.1016/j.dib.2020.105700 |
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