Cargando…

GEval: A Modular and Extensible Evaluation Framework for Graph Embedding Techniques

While RDF data are graph shaped by nature, most traditional Machine Learning (ML) algorithms expect data in a vector form. To transform graph elements to vectors, several graph embedding approaches have been proposed. Comparing these approaches is interesting for 1) developers of new embedding techn...

Descripción completa

Detalles Bibliográficos
Autores principales: Pellegrino, Maria Angela, Altabba, Abdulrahman, Garofalo, Martina, Ristoski, Petar, Cochez, Michael
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7250612/
http://dx.doi.org/10.1007/978-3-030-49461-2_33
_version_ 1783538796370853888
author Pellegrino, Maria Angela
Altabba, Abdulrahman
Garofalo, Martina
Ristoski, Petar
Cochez, Michael
author_facet Pellegrino, Maria Angela
Altabba, Abdulrahman
Garofalo, Martina
Ristoski, Petar
Cochez, Michael
author_sort Pellegrino, Maria Angela
collection PubMed
description While RDF data are graph shaped by nature, most traditional Machine Learning (ML) algorithms expect data in a vector form. To transform graph elements to vectors, several graph embedding approaches have been proposed. Comparing these approaches is interesting for 1) developers of new embedding techniques to verify in which cases their proposal outperforms the state-of-art and 2) consumers of these techniques in choosing the best approach according to the task(s) the vectors will be used for. The comparison could be delayed (and made difficult) by the choice of tasks, the design of the evaluation, the selection of models, parameters, and needed datasets. We propose GEval, an evaluation framework to simplify the evaluation and the comparison of graph embedding techniques. The covered tasks range from ML tasks (Classification, Regression, Clustering), semantic tasks (entity relatedness, document similarity) to semantic analogies. However, GEval is designed to be (easily) extensible. In this article, we will describe the design and development of the proposed framework by detailing its overall structure, the already implemented tasks, and how to extend it. In conclusion, to demonstrate its operating approach, we consider the parameter tuning of the KGloVe algorithm as a use case.
format Online
Article
Text
id pubmed-7250612
institution National Center for Biotechnology Information
language English
publishDate 2020
record_format MEDLINE/PubMed
spelling pubmed-72506122020-05-27 GEval: A Modular and Extensible Evaluation Framework for Graph Embedding Techniques Pellegrino, Maria Angela Altabba, Abdulrahman Garofalo, Martina Ristoski, Petar Cochez, Michael The Semantic Web Article While RDF data are graph shaped by nature, most traditional Machine Learning (ML) algorithms expect data in a vector form. To transform graph elements to vectors, several graph embedding approaches have been proposed. Comparing these approaches is interesting for 1) developers of new embedding techniques to verify in which cases their proposal outperforms the state-of-art and 2) consumers of these techniques in choosing the best approach according to the task(s) the vectors will be used for. The comparison could be delayed (and made difficult) by the choice of tasks, the design of the evaluation, the selection of models, parameters, and needed datasets. We propose GEval, an evaluation framework to simplify the evaluation and the comparison of graph embedding techniques. The covered tasks range from ML tasks (Classification, Regression, Clustering), semantic tasks (entity relatedness, document similarity) to semantic analogies. However, GEval is designed to be (easily) extensible. In this article, we will describe the design and development of the proposed framework by detailing its overall structure, the already implemented tasks, and how to extend it. In conclusion, to demonstrate its operating approach, we consider the parameter tuning of the KGloVe algorithm as a use case. 2020-05-07 /pmc/articles/PMC7250612/ http://dx.doi.org/10.1007/978-3-030-49461-2_33 Text en © Springer Nature Switzerland AG 2020 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Pellegrino, Maria Angela
Altabba, Abdulrahman
Garofalo, Martina
Ristoski, Petar
Cochez, Michael
GEval: A Modular and Extensible Evaluation Framework for Graph Embedding Techniques
title GEval: A Modular and Extensible Evaluation Framework for Graph Embedding Techniques
title_full GEval: A Modular and Extensible Evaluation Framework for Graph Embedding Techniques
title_fullStr GEval: A Modular and Extensible Evaluation Framework for Graph Embedding Techniques
title_full_unstemmed GEval: A Modular and Extensible Evaluation Framework for Graph Embedding Techniques
title_short GEval: A Modular and Extensible Evaluation Framework for Graph Embedding Techniques
title_sort geval: a modular and extensible evaluation framework for graph embedding techniques
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7250612/
http://dx.doi.org/10.1007/978-3-030-49461-2_33
work_keys_str_mv AT pellegrinomariaangela gevalamodularandextensibleevaluationframeworkforgraphembeddingtechniques
AT altabbaabdulrahman gevalamodularandextensibleevaluationframeworkforgraphembeddingtechniques
AT garofalomartina gevalamodularandextensibleevaluationframeworkforgraphembeddingtechniques
AT ristoskipetar gevalamodularandextensibleevaluationframeworkforgraphembeddingtechniques
AT cochezmichael gevalamodularandextensibleevaluationframeworkforgraphembeddingtechniques