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Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study
The role of host microbes in the pathogenesis of several diseases has been established, and altered microbiomes have been related to diseases. However, the variability of the urinary microbiome in individuals with gout has not been evaluated to date. Therefore, we conducted the present prospective s...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7251145/ https://www.ncbi.nlm.nih.gov/pubmed/32508748 http://dx.doi.org/10.3389/fendo.2020.00272 |
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author | Ning, Yaogui Yang, Guomei Chen, Yangchun Zhao, Xue Qian, Hongyan Liu, Yuan Chen, Shiju Shi, Guixiu |
author_facet | Ning, Yaogui Yang, Guomei Chen, Yangchun Zhao, Xue Qian, Hongyan Liu, Yuan Chen, Shiju Shi, Guixiu |
author_sort | Ning, Yaogui |
collection | PubMed |
description | The role of host microbes in the pathogenesis of several diseases has been established, and altered microbiomes have been related to diseases. However, the variability of the urinary microbiome in individuals with gout has not been evaluated to date. Therefore, we conducted the present prospective study to characterize the urinary microbiome and its potential relation to gout. Urine samples from 30 patients with gout and 30 healthy controls were analyzed by Illumina MiSeq sequencing of the 16S rRNA hypervariable regions, and the microbiomes were compared according to alpha-diversity indices, complexity (beta diversity) with principal component analysis, and composition with linear discriminant analysis effect size. The most significantly different taxa at the phylum and genus levels were identified, and their potential as biomarkers for discriminating gout patients was assessed based on receiver operating characteristic (ROC) curve analysis. Compared with the healthy controls, there was a dramatic decrease in microbial richness and diversity in the urine of gout patients. The phylum Firmicutes and its derivatives (Lactobacillus_iners, Family_XI, and Finegoldia), the phylum Actinobacteria and its derivatives (unidentified_Actinobacteria, Corynebacteriales, Corynebacteriale, Corynebacterium_1, and Corynebacterium_tuberculostearicum), and the genera Prevotella and Corynebacterium_1 were significantly enriched in the urine of gout patients. ROC analysis indicated that the top five altered microbial genera could be reliable markers for distinguishing gout patients from healthy individuals. These findings demonstrate that there are specific alterations in the microbial diversity of gout patients. Thus, further studies on the causal relationship between gout and the urinary microbiome will offer new prospects for diagnosing, preventing, and treating gout. |
format | Online Article Text |
id | pubmed-7251145 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72511452020-06-05 Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study Ning, Yaogui Yang, Guomei Chen, Yangchun Zhao, Xue Qian, Hongyan Liu, Yuan Chen, Shiju Shi, Guixiu Front Endocrinol (Lausanne) Endocrinology The role of host microbes in the pathogenesis of several diseases has been established, and altered microbiomes have been related to diseases. However, the variability of the urinary microbiome in individuals with gout has not been evaluated to date. Therefore, we conducted the present prospective study to characterize the urinary microbiome and its potential relation to gout. Urine samples from 30 patients with gout and 30 healthy controls were analyzed by Illumina MiSeq sequencing of the 16S rRNA hypervariable regions, and the microbiomes were compared according to alpha-diversity indices, complexity (beta diversity) with principal component analysis, and composition with linear discriminant analysis effect size. The most significantly different taxa at the phylum and genus levels were identified, and their potential as biomarkers for discriminating gout patients was assessed based on receiver operating characteristic (ROC) curve analysis. Compared with the healthy controls, there was a dramatic decrease in microbial richness and diversity in the urine of gout patients. The phylum Firmicutes and its derivatives (Lactobacillus_iners, Family_XI, and Finegoldia), the phylum Actinobacteria and its derivatives (unidentified_Actinobacteria, Corynebacteriales, Corynebacteriale, Corynebacterium_1, and Corynebacterium_tuberculostearicum), and the genera Prevotella and Corynebacterium_1 were significantly enriched in the urine of gout patients. ROC analysis indicated that the top five altered microbial genera could be reliable markers for distinguishing gout patients from healthy individuals. These findings demonstrate that there are specific alterations in the microbial diversity of gout patients. Thus, further studies on the causal relationship between gout and the urinary microbiome will offer new prospects for diagnosing, preventing, and treating gout. Frontiers Media S.A. 2020-05-20 /pmc/articles/PMC7251145/ /pubmed/32508748 http://dx.doi.org/10.3389/fendo.2020.00272 Text en Copyright © 2020 Ning, Yang, Chen, Zhao, Qian, Liu, Chen and Shi. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Endocrinology Ning, Yaogui Yang, Guomei Chen, Yangchun Zhao, Xue Qian, Hongyan Liu, Yuan Chen, Shiju Shi, Guixiu Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study |
title | Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study |
title_full | Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study |
title_fullStr | Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study |
title_full_unstemmed | Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study |
title_short | Characteristics of the Urinary Microbiome From Patients With Gout: A Prospective Study |
title_sort | characteristics of the urinary microbiome from patients with gout: a prospective study |
topic | Endocrinology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7251145/ https://www.ncbi.nlm.nih.gov/pubmed/32508748 http://dx.doi.org/10.3389/fendo.2020.00272 |
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