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Identification of hub genes related to prognosis in glioma

Glioma, a common malignant tumor of the central nervous system, has high invasiveness. The objective of the present study was to identify genes playing an important role in the development of glioma and to reveal their potential research value. Conjoint analysis on the GSE16011 dataset in the Gene E...

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Autores principales: Zhang, Delong, Zhao, Jinxia, Han, Chengzheng, Liu, Xiaocen, Liu, Jun, Yang, Hui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7253401/
https://www.ncbi.nlm.nih.gov/pubmed/32406502
http://dx.doi.org/10.1042/BSR20193377
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author Zhang, Delong
Zhao, Jinxia
Han, Chengzheng
Liu, Xiaocen
Liu, Jun
Yang, Hui
author_facet Zhang, Delong
Zhao, Jinxia
Han, Chengzheng
Liu, Xiaocen
Liu, Jun
Yang, Hui
author_sort Zhang, Delong
collection PubMed
description Glioma, a common malignant tumor of the central nervous system, has high invasiveness. The objective of the present study was to identify genes playing an important role in the development of glioma and to reveal their potential research value. Conjoint analysis on the GSE16011 dataset in the Gene Expression Omnibus (GEO) database and the ‘Messenger RNA Expression Microarray of Diffuse Gliomas and Controls’ dataset and ‘RNA sequencing of Diffuse Gliomas’ dataset in the Chinese Glioma Genome Atlas (CGGA) database is carried out in the study. The weighted correlation network analysis (WGCNA) was used to carry out co-expression analysis on the GSE16011. Finally, 24 genes significantly related to grade and prognosis were obtained. In addition, there is no report about CACNG2, JPH3, TUBB6 (tubulin β 6 class V), NRSN1, FAM19A2, NALCN, CDH18, GNAL on glioma.
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spelling pubmed-72534012020-06-08 Identification of hub genes related to prognosis in glioma Zhang, Delong Zhao, Jinxia Han, Chengzheng Liu, Xiaocen Liu, Jun Yang, Hui Biosci Rep Bioinformatics Glioma, a common malignant tumor of the central nervous system, has high invasiveness. The objective of the present study was to identify genes playing an important role in the development of glioma and to reveal their potential research value. Conjoint analysis on the GSE16011 dataset in the Gene Expression Omnibus (GEO) database and the ‘Messenger RNA Expression Microarray of Diffuse Gliomas and Controls’ dataset and ‘RNA sequencing of Diffuse Gliomas’ dataset in the Chinese Glioma Genome Atlas (CGGA) database is carried out in the study. The weighted correlation network analysis (WGCNA) was used to carry out co-expression analysis on the GSE16011. Finally, 24 genes significantly related to grade and prognosis were obtained. In addition, there is no report about CACNG2, JPH3, TUBB6 (tubulin β 6 class V), NRSN1, FAM19A2, NALCN, CDH18, GNAL on glioma. Portland Press Ltd. 2020-05-27 /pmc/articles/PMC7253401/ /pubmed/32406502 http://dx.doi.org/10.1042/BSR20193377 Text en © 2020 The Author(s). https://creativecommons.org/licenses/by/4.0/ This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY).
spellingShingle Bioinformatics
Zhang, Delong
Zhao, Jinxia
Han, Chengzheng
Liu, Xiaocen
Liu, Jun
Yang, Hui
Identification of hub genes related to prognosis in glioma
title Identification of hub genes related to prognosis in glioma
title_full Identification of hub genes related to prognosis in glioma
title_fullStr Identification of hub genes related to prognosis in glioma
title_full_unstemmed Identification of hub genes related to prognosis in glioma
title_short Identification of hub genes related to prognosis in glioma
title_sort identification of hub genes related to prognosis in glioma
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7253401/
https://www.ncbi.nlm.nih.gov/pubmed/32406502
http://dx.doi.org/10.1042/BSR20193377
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