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Complex Reporting of the COVID-19 Epidemic in the Czech Republic: Use of an Interactive Web-Based App in Practice

BACKGROUND: The beginning of the coronavirus disease (COVID-19) epidemic dates back to December 31, 2019, when the first cases were reported in the People’s Republic of China. In the Czech Republic, the first three cases of infection with the novel coronavirus were confirmed on March 1, 2020. The jo...

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Autores principales: Komenda, Martin, Bulhart, Vojtěch, Karolyi, Matěj, Jarkovský, Jiří, Mužík, Jan, Májek, Ondřej, Šnajdrová, Lenka, Růžičková, Petra, Rážová, Jarmila, Prymula, Roman, Macková, Barbora, Březovský, Pavel, Marounek, Jan, Černý, Vladimír, Dušek, Ladislav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7254961/
https://www.ncbi.nlm.nih.gov/pubmed/32412422
http://dx.doi.org/10.2196/19367
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author Komenda, Martin
Bulhart, Vojtěch
Karolyi, Matěj
Jarkovský, Jiří
Mužík, Jan
Májek, Ondřej
Šnajdrová, Lenka
Růžičková, Petra
Rážová, Jarmila
Prymula, Roman
Macková, Barbora
Březovský, Pavel
Marounek, Jan
Černý, Vladimír
Dušek, Ladislav
author_facet Komenda, Martin
Bulhart, Vojtěch
Karolyi, Matěj
Jarkovský, Jiří
Mužík, Jan
Májek, Ondřej
Šnajdrová, Lenka
Růžičková, Petra
Rážová, Jarmila
Prymula, Roman
Macková, Barbora
Březovský, Pavel
Marounek, Jan
Černý, Vladimír
Dušek, Ladislav
author_sort Komenda, Martin
collection PubMed
description BACKGROUND: The beginning of the coronavirus disease (COVID-19) epidemic dates back to December 31, 2019, when the first cases were reported in the People’s Republic of China. In the Czech Republic, the first three cases of infection with the novel coronavirus were confirmed on March 1, 2020. The joint effort of state authorities and researchers gave rise to a unique team, which combines methodical knowledge of real-world processes with the know-how needed for effective processing, analysis, and online visualization of data. OBJECTIVE: Due to an urgent need for a tool that presents important reports based on valid data sources, a team of government experts and researchers focused on the design and development of a web app intended to provide a regularly updated overview of COVID-19 epidemiology in the Czech Republic to the general population. METHODS: The cross-industry standard process for data mining model was chosen for the complex solution of analytical processing and visualization of data that provides validated information on the COVID-19 epidemic across the Czech Republic. Great emphasis was put on the understanding and a correct implementation of all six steps (business understanding, data understanding, data preparation, modelling, evaluation, and deployment) needed in the process, including the infrastructure of a nationwide information system; the methodological setting of communication channels between all involved stakeholders; and data collection, processing, analysis, validation, and visualization. RESULTS: The web-based overview of the current spread of COVID-19 in the Czech Republic has been developed as an online platform providing a set of outputs in the form of tables, graphs, and maps intended for the general public. On March 12, 2020, the first version of the web portal, containing fourteen overviews divided into five topical sections, was released. The web portal’s primary objective is to publish a well-arranged visualization and clear explanation of basic information consisting of the overall numbers of performed tests, confirmed cases of COVID-19, COVID-19-related deaths, the daily and cumulative overviews of people with a positive COVID-19 case, performed tests, location and country of infection of people with a positive COVID-19 case, hospitalizations of patients with COVID-19, and distribution of personal protective equipment. CONCLUSIONS: The online interactive overview of the current spread of COVID-19 in the Czech Republic was launched on March 11, 2020, and has immediately become the primary communication channel employed by the health care sector to present the current situation regarding the COVID-19 epidemic. This complex reporting of the COVID-19 epidemic in the Czech Republic also shows an effective way to interconnect knowledge held by various specialists, such as regional and national methodology experts (who report positive cases of the disease on a daily basis), with knowledge held by developers of central registries, analysts, developers of web apps, and leaders in the health care sector.
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spelling pubmed-72549612020-06-03 Complex Reporting of the COVID-19 Epidemic in the Czech Republic: Use of an Interactive Web-Based App in Practice Komenda, Martin Bulhart, Vojtěch Karolyi, Matěj Jarkovský, Jiří Mužík, Jan Májek, Ondřej Šnajdrová, Lenka Růžičková, Petra Rážová, Jarmila Prymula, Roman Macková, Barbora Březovský, Pavel Marounek, Jan Černý, Vladimír Dušek, Ladislav J Med Internet Res Original Paper BACKGROUND: The beginning of the coronavirus disease (COVID-19) epidemic dates back to December 31, 2019, when the first cases were reported in the People’s Republic of China. In the Czech Republic, the first three cases of infection with the novel coronavirus were confirmed on March 1, 2020. The joint effort of state authorities and researchers gave rise to a unique team, which combines methodical knowledge of real-world processes with the know-how needed for effective processing, analysis, and online visualization of data. OBJECTIVE: Due to an urgent need for a tool that presents important reports based on valid data sources, a team of government experts and researchers focused on the design and development of a web app intended to provide a regularly updated overview of COVID-19 epidemiology in the Czech Republic to the general population. METHODS: The cross-industry standard process for data mining model was chosen for the complex solution of analytical processing and visualization of data that provides validated information on the COVID-19 epidemic across the Czech Republic. Great emphasis was put on the understanding and a correct implementation of all six steps (business understanding, data understanding, data preparation, modelling, evaluation, and deployment) needed in the process, including the infrastructure of a nationwide information system; the methodological setting of communication channels between all involved stakeholders; and data collection, processing, analysis, validation, and visualization. RESULTS: The web-based overview of the current spread of COVID-19 in the Czech Republic has been developed as an online platform providing a set of outputs in the form of tables, graphs, and maps intended for the general public. On March 12, 2020, the first version of the web portal, containing fourteen overviews divided into five topical sections, was released. The web portal’s primary objective is to publish a well-arranged visualization and clear explanation of basic information consisting of the overall numbers of performed tests, confirmed cases of COVID-19, COVID-19-related deaths, the daily and cumulative overviews of people with a positive COVID-19 case, performed tests, location and country of infection of people with a positive COVID-19 case, hospitalizations of patients with COVID-19, and distribution of personal protective equipment. CONCLUSIONS: The online interactive overview of the current spread of COVID-19 in the Czech Republic was launched on March 11, 2020, and has immediately become the primary communication channel employed by the health care sector to present the current situation regarding the COVID-19 epidemic. This complex reporting of the COVID-19 epidemic in the Czech Republic also shows an effective way to interconnect knowledge held by various specialists, such as regional and national methodology experts (who report positive cases of the disease on a daily basis), with knowledge held by developers of central registries, analysts, developers of web apps, and leaders in the health care sector. JMIR Publications 2020-05-27 /pmc/articles/PMC7254961/ /pubmed/32412422 http://dx.doi.org/10.2196/19367 Text en ©Martin Komenda, Vojtěch Bulhart, Matěj Karolyi, Jiří Jarkovský, Jan Mužík, Ondřej Májek, Lenka Šnajdrová, Petra Růžičková, Jarmila Rážová, Roman Prymula, Barbora Macková, Pavel Březovský, Jan Marounek, Vladimír Černý, Ladislav Dušek. Originally published in the Journal of Medical Internet Research (http://www.jmir.org), 27.05.2020. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in the Journal of Medical Internet Research, is properly cited. The complete bibliographic information, a link to the original publication on http://www.jmir.org/, as well as this copyright and license information must be included.
spellingShingle Original Paper
Komenda, Martin
Bulhart, Vojtěch
Karolyi, Matěj
Jarkovský, Jiří
Mužík, Jan
Májek, Ondřej
Šnajdrová, Lenka
Růžičková, Petra
Rážová, Jarmila
Prymula, Roman
Macková, Barbora
Březovský, Pavel
Marounek, Jan
Černý, Vladimír
Dušek, Ladislav
Complex Reporting of the COVID-19 Epidemic in the Czech Republic: Use of an Interactive Web-Based App in Practice
title Complex Reporting of the COVID-19 Epidemic in the Czech Republic: Use of an Interactive Web-Based App in Practice
title_full Complex Reporting of the COVID-19 Epidemic in the Czech Republic: Use of an Interactive Web-Based App in Practice
title_fullStr Complex Reporting of the COVID-19 Epidemic in the Czech Republic: Use of an Interactive Web-Based App in Practice
title_full_unstemmed Complex Reporting of the COVID-19 Epidemic in the Czech Republic: Use of an Interactive Web-Based App in Practice
title_short Complex Reporting of the COVID-19 Epidemic in the Czech Republic: Use of an Interactive Web-Based App in Practice
title_sort complex reporting of the covid-19 epidemic in the czech republic: use of an interactive web-based app in practice
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7254961/
https://www.ncbi.nlm.nih.gov/pubmed/32412422
http://dx.doi.org/10.2196/19367
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