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Genome-wide identification and characterization of the fibrillin gene family in Triticum aestivum

BACKGROUND: The fibrillin (FBN) gene family is highly conserved and widely distributed in the photosynthetic organs of plants. Members of this gene family are involved in the growth and development of plants and their response to biotic and abiotic stresses. Wheat (Triticum aestivum), an important f...

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Autores principales: Jiang, Yaoyao, Hu, Haichao, Ma, Yuhua, Zhou, Junliang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7258936/
https://www.ncbi.nlm.nih.gov/pubmed/32518731
http://dx.doi.org/10.7717/peerj.9225
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author Jiang, Yaoyao
Hu, Haichao
Ma, Yuhua
Zhou, Junliang
author_facet Jiang, Yaoyao
Hu, Haichao
Ma, Yuhua
Zhou, Junliang
author_sort Jiang, Yaoyao
collection PubMed
description BACKGROUND: The fibrillin (FBN) gene family is highly conserved and widely distributed in the photosynthetic organs of plants. Members of this gene family are involved in the growth and development of plants and their response to biotic and abiotic stresses. Wheat (Triticum aestivum), an important food crop, has a complex genetic background and little progress has occurred in the understanding of its molecular mechanisms. METHODS: In this study, we identified 26 FBN genes in the whole genome of T. aestivum through bioinformatic tools and biotechnological means. These genes were divided into 11 subgroups and were distributed on 11 chromosomes of T. aestivum. Interestingly, most of the TaFBN genes were located on the chromosomes 2A, 2B and 2D. The gene structure of each subgroup of gene family members and the position and number of motifs were highly similar. RESULTS: The evolutionary analysis results indicated that the affinities of FBNs in monocots were closer together. The tissue-specific analysis revealed that TaFBN genes were expressed in different tissues and developmental stages. In addition, some TaFBNs were involved in one or more biotic and abiotic stress responses. These results provide a basis for further study of the biological function of FBNs.
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spelling pubmed-72589362020-06-08 Genome-wide identification and characterization of the fibrillin gene family in Triticum aestivum Jiang, Yaoyao Hu, Haichao Ma, Yuhua Zhou, Junliang PeerJ Agricultural Science BACKGROUND: The fibrillin (FBN) gene family is highly conserved and widely distributed in the photosynthetic organs of plants. Members of this gene family are involved in the growth and development of plants and their response to biotic and abiotic stresses. Wheat (Triticum aestivum), an important food crop, has a complex genetic background and little progress has occurred in the understanding of its molecular mechanisms. METHODS: In this study, we identified 26 FBN genes in the whole genome of T. aestivum through bioinformatic tools and biotechnological means. These genes were divided into 11 subgroups and were distributed on 11 chromosomes of T. aestivum. Interestingly, most of the TaFBN genes were located on the chromosomes 2A, 2B and 2D. The gene structure of each subgroup of gene family members and the position and number of motifs were highly similar. RESULTS: The evolutionary analysis results indicated that the affinities of FBNs in monocots were closer together. The tissue-specific analysis revealed that TaFBN genes were expressed in different tissues and developmental stages. In addition, some TaFBNs were involved in one or more biotic and abiotic stress responses. These results provide a basis for further study of the biological function of FBNs. PeerJ Inc. 2020-05-26 /pmc/articles/PMC7258936/ /pubmed/32518731 http://dx.doi.org/10.7717/peerj.9225 Text en ©2020 Jiang et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Agricultural Science
Jiang, Yaoyao
Hu, Haichao
Ma, Yuhua
Zhou, Junliang
Genome-wide identification and characterization of the fibrillin gene family in Triticum aestivum
title Genome-wide identification and characterization of the fibrillin gene family in Triticum aestivum
title_full Genome-wide identification and characterization of the fibrillin gene family in Triticum aestivum
title_fullStr Genome-wide identification and characterization of the fibrillin gene family in Triticum aestivum
title_full_unstemmed Genome-wide identification and characterization of the fibrillin gene family in Triticum aestivum
title_short Genome-wide identification and characterization of the fibrillin gene family in Triticum aestivum
title_sort genome-wide identification and characterization of the fibrillin gene family in triticum aestivum
topic Agricultural Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7258936/
https://www.ncbi.nlm.nih.gov/pubmed/32518731
http://dx.doi.org/10.7717/peerj.9225
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