Cargando…

Low Turnover of Soil Bacterial rRNA at Low Temperatures

Ribosomal RNA (rRNA) is used widely to investigate potentially active microorganisms in environmental samples, including soil microorganisms and other microbial communities that are subjected to pronounced seasonal variation in temperature. This raises a question about the turnover of intracellular...

Descripción completa

Detalles Bibliográficos
Autores principales:	Schostag, Morten Dencker, Albers, Christian Nyrop, Jacobsen, Carsten Suhr, Priemé, Anders
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2020
Materias:	Microbiology
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7261852/ https://www.ncbi.nlm.nih.gov/pubmed/32523564 http://dx.doi.org/10.3389/fmicb.2020.00962

Ejemplares similares

Potential microbial contamination during sampling of permafrost soil assessed by tracers
por: Bang-Andreasen, Toke, et al.
Publicado: (2017)

Erratum: Potential microbial contamination during sampling of permafrost soil assessed by tracers
por: Bang-Andreasen, Toke, et al.
Publicado: (2017)

Distinct summer and winter bacterial communities in the active layer of Svalbard permafrost revealed by DNA- and RNA-based analyses
por: Schostag, Morten, et al.
Publicado: (2015)

Legacy Effects on the Recovery of Soil Bacterial Communities from Extreme Temperature Perturbation
por: Jurburg, Stephanie D., et al.
Publicado: (2017)

Pesticide Side Effects in an Agricultural Soil Ecosystem as Measured by amoA Expression Quantification and Bacterial Diversity Changes
por: Feld, Louise, et al.
Publicado: (2015)

Beyond Taxonomic Identification: Integration of Ecological Responses to a Soil Bacterial 16S rRNA Gene Database
por: Jones, Briony, et al.
Publicado: (2021)

Identification of an Alternative rRNA Post-transcriptional Maturation of 26S rRNA in the Kingdom Fungi
por: Navarro-Ródenas, Alfonso, et al.
Publicado: (2018)

Size Matters: Assessing Optimum Soil Sample Size for Fungal and Bacterial Community Structure Analyses Using High Throughput Sequencing of rRNA Gene Amplicons
por: Penton, C. Ryan, et al.
Publicado: (2016)

Extreme Emission of N(2)O from Tropical Wetland Soil (Pantanal, South America)
por: Liengaard, Lars, et al.
Publicado: (2013)

The Impact of Hydration and Temperature on Bacterial Diversity in Arid Soil Mesocosms
por: Št'ovíček, Adam, et al.
Publicado: (2017)

Effects of Reforestation on the Structure and Diversity of Bacterial Communities in Subtropical Low Mountain Forest Soils
por: Lin, Yu-Te, et al.
Publicado: (2018)

Tissue-Associated Bacterial Alterations in Rectal Carcinoma Patients Revealed by 16S rRNA Community Profiling
por: Thomas, Andrew M., et al.
Publicado: (2016)

Bacterial Community 16S rRNA Gene Sequencing Characterizes Riverine Microbial Impact on Lake Michigan
por: Nakatsu, Cindy H., et al.
Publicado: (2019)

Improving the Diagnosis of Bacterial Infections: Evaluation of 16S rRNA Nanopore Metagenomics in Culture-Negative Samples
por: Bouchiat, Coralie, et al.
Publicado: (2022)

Different bacterial communities in heat and gamma irradiation treated replant disease soils revealed by 16S rRNA gene analysis – contribution to improved aboveground apple plant growth?
por: Yim, Bunlong, et al.
Publicado: (2015)

Rhizosphere bacterial carbon turnover is higher in nucleic acids than membrane lipids: implications for understanding soil carbon cycling
por: Malik, Ashish A., et al.
Publicado: (2015)

Evaluation of 16S rRNA Gene Primer Pairs for Monitoring Microbial Community Structures Showed High Reproducibility within and Low Comparability between Datasets Generated with Multiple Archaeal and Bacterial Primer Pairs
por: Fischer, Martin A., et al.
Publicado: (2016)

Counting the Countless: Bacterial Quantification by Targeting rRNA Molecules to Explore the Human Gut Microbiota in Health and Disease
por: Tsuji, Hirokazu, et al.
Publicado: (2018)

Influence of 16S rRNA Hypervariable Region on Estimates of Bacterial Diversity and Community Composition in Seawater and Marine Sediment
por: Kerrigan, Zak, et al.
Publicado: (2019)

A Comparison of Three Different Bioinformatics Analyses of the 16S–23S rRNA Encoding Region for Bacterial Identification
por: Peker, Nilay, et al.
Publicado: (2019)

Identification of bacterial pathogens in sudden unexpected death in infancy and childhood using 16S rRNA gene sequencing
por: Gates, Lily, et al.
Publicado: (2023)

Microbial abundance in surface ice on the Greenland Ice Sheet
por: Stibal, Marek, et al.
Publicado: (2015)

Temperature-Dependent Network Modules of Soil Methanogenic Bacterial and Archaeal Communities
por: Liu, Pengfei, et al.
Publicado: (2019)

Expression and Function of Different Guanine-Plus-Cytosine Content 16S rRNA Genes in Haloarcula hispanica at Different Temperatures
por: Sato, Yu, et al.
Publicado: (2017)

Wood Ash Induced pH Changes Strongly Affect Soil Bacterial Numbers and Community Composition
por: Bang-Andreasen, Toke, et al.
Publicado: (2017)

Soil Property and Plant Diversity Determine Bacterial Turnover and Network Interactions in a Typical Arid Inland River Basin, Northwest China
por: Wang, Wenjuan, et al.
Publicado: (2019)

Benthic Bacterial Community Composition in the Oligohaline-Marine Transition of Surface Sediments in the Baltic Sea Based on rRNA Analysis
por: Klier, Julia, et al.
Publicado: (2018)

Nematodes and Microorganisms Interactively Stimulate Soil Organic Carbon Turnover in the Macroaggregates
por: Jiang, Yuji, et al.
Publicado: (2018)

The ability of Phaeobacter inhibens to produce tropodithietic acid influences the community dynamics of a microalgal microbiome
por: Henriksen, Nathalie Nina Suhr Eiris, et al.
Publicado: (2022)

Critical Relevance of Stochastic Effects on Low-Bacterial-Biomass 16S rRNA Gene Analysis
por: Erb-Downward, John R., et al.
Publicado: (2020)

Characterizing the Human Mycobiota: A Comparison of Small Subunit rRNA, ITS1, ITS2, and Large Subunit rRNA Genomic Targets
por: Hoggard, Michael, et al.
Publicado: (2018)

Comparison of bacterial culture and 16S rRNA community profiling by clonal analysis and pyrosequencing for the characterization of the dentine caries-associated microbiome
por: Schulze-Schweifing, Kathrin, et al.
Publicado: (2014)

Stratified Bacterial and Archaeal Community in Mangrove and Intertidal Wetland Mudflats Revealed by High Throughput 16S rRNA Gene Sequencing
por: Zhou, Zhichao, et al.
Publicado: (2017)

Whole-Cell MALDI-TOF MS Versus 16S rRNA Gene Analysis for Identification and Dereplication of Recurrent Bacterial Isolates
por: Strejcek, Michal, et al.
Publicado: (2018)

Diversity and Structure of the Endophytic Bacterial Communities Associated With Three Terrestrial Orchid Species as Revealed by 16S rRNA Gene Metabarcoding
por: Alibrandi, Pasquale, et al.
Publicado: (2020)

Relative Weight of Organic Waste Origin on Compost and Digestate 16S rRNA Gene Bacterial Profilings and Related Functional Inferences
por: Aigle, Axel, et al.
Publicado: (2021)

Primer and platform effects on 16S rRNA tag sequencing
por: Tremblay, Julien, et al.
Publicado: (2015)

The Impact of Soil-Applied Biochars From Different Vegetal Feedstocks on Durum Wheat Plant Performance and Rhizospheric Bacterial Microbiota in Low Metal-Contaminated Soil
por: Latini, Arianna, et al.
Publicado: (2019)

Diversity Manipulation of Psychrophilic Bacterial Consortia for Improved Biological Treatment of Medium-Strength Wastewater at Low Temperature
por: Augelletti, Floriana, et al.
Publicado: (2020)

Diversity within Italian Cheesemaking Brine-Associated Bacterial Communities Evidenced by Massive Parallel 16S rRNA Gene Tag Sequencing
por: Marino, Marilena, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_8gelp0289i5kc2us9k6se6fokl