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Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System”
OBJECTIVE: To supply the attending doctor’s diagnosis of the persisting of cerebral small vessel disease and speed up their work effectively, we developed a “deep learning system (DLS)” for cerebral small vessel disease predication. The reliability and the disease area segmentation accuracy, of the...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7261942/ https://www.ncbi.nlm.nih.gov/pubmed/32523523 http://dx.doi.org/10.3389/fninf.2020.00017 |
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author | Duan, Yunyun Shan, Wei Liu, Liying Wang, Qun Wu, Zhenzhou Liu, Pan Ji, Jiahao Liu, Yaou He, Kunlun Wang, Yongjun |
author_facet | Duan, Yunyun Shan, Wei Liu, Liying Wang, Qun Wu, Zhenzhou Liu, Pan Ji, Jiahao Liu, Yaou He, Kunlun Wang, Yongjun |
author_sort | Duan, Yunyun |
collection | PubMed |
description | OBJECTIVE: To supply the attending doctor’s diagnosis of the persisting of cerebral small vessel disease and speed up their work effectively, we developed a “deep learning system (DLS)” for cerebral small vessel disease predication. The reliability and the disease area segmentation accuracy, of the proposed DLS, was also investigated. METHODS: A deep learning model based on the convolutional neural network was designed and trained on 1,010 DWI b1000 images from 1010 patients diagnosed with segmentation of subcortical infarction, 359 T2(∗) images from 359 patients diagnosed with segmentation of cerebral microbleed, as well as 824 T1-weighted and T2-FLAIR images from 824 patients diagnosed with segmentation of lacune and WMH. Dicw accuracy, recall, and f1-score were calculated to evaluate the proposed deep learning model. Finally, we also compared the DLS prediction capability with that of 6 doctors with 3 to 18 years’ clinical experience (8 ± 6 years). RESULTS: The results support that an appropriately trained DLS can achieve a high-level dice accuracy, 0.598 in the training section over all these four classifications on 30 patients (0.576 for young neuroradiologists), validation accuracy is 0.496 in lacune, 0.666 in WMH, 0.728 in subcortical infarction, and 0.503 in cerebral microbleeds. It is comparable to attending doctor with a few years of experience, regardless of whether the emphasis is placed on the segmentation or detection of lesions with less time-spending compared with manual analysis, about 4.4 s/case, which is dramatically less than doctors about 634 s/case. CONCLUSION: The results of our comparison lend support to the case that an appropriately trained DLS can be trusted to the same extent as one would trust an attending doctor with a few years of experience, regardless of whether the emphasis is placed on the segmentation or detection of lesions. |
format | Online Article Text |
id | pubmed-7261942 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72619422020-06-09 Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System” Duan, Yunyun Shan, Wei Liu, Liying Wang, Qun Wu, Zhenzhou Liu, Pan Ji, Jiahao Liu, Yaou He, Kunlun Wang, Yongjun Front Neuroinform Neuroscience OBJECTIVE: To supply the attending doctor’s diagnosis of the persisting of cerebral small vessel disease and speed up their work effectively, we developed a “deep learning system (DLS)” for cerebral small vessel disease predication. The reliability and the disease area segmentation accuracy, of the proposed DLS, was also investigated. METHODS: A deep learning model based on the convolutional neural network was designed and trained on 1,010 DWI b1000 images from 1010 patients diagnosed with segmentation of subcortical infarction, 359 T2(∗) images from 359 patients diagnosed with segmentation of cerebral microbleed, as well as 824 T1-weighted and T2-FLAIR images from 824 patients diagnosed with segmentation of lacune and WMH. Dicw accuracy, recall, and f1-score were calculated to evaluate the proposed deep learning model. Finally, we also compared the DLS prediction capability with that of 6 doctors with 3 to 18 years’ clinical experience (8 ± 6 years). RESULTS: The results support that an appropriately trained DLS can achieve a high-level dice accuracy, 0.598 in the training section over all these four classifications on 30 patients (0.576 for young neuroradiologists), validation accuracy is 0.496 in lacune, 0.666 in WMH, 0.728 in subcortical infarction, and 0.503 in cerebral microbleeds. It is comparable to attending doctor with a few years of experience, regardless of whether the emphasis is placed on the segmentation or detection of lesions with less time-spending compared with manual analysis, about 4.4 s/case, which is dramatically less than doctors about 634 s/case. CONCLUSION: The results of our comparison lend support to the case that an appropriately trained DLS can be trusted to the same extent as one would trust an attending doctor with a few years of experience, regardless of whether the emphasis is placed on the segmentation or detection of lesions. Frontiers Media S.A. 2020-05-25 /pmc/articles/PMC7261942/ /pubmed/32523523 http://dx.doi.org/10.3389/fninf.2020.00017 Text en Copyright © 2020 Duan, Shan, Liu, Wang, Wu, Liu, Ji, Liu, He and Wang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Duan, Yunyun Shan, Wei Liu, Liying Wang, Qun Wu, Zhenzhou Liu, Pan Ji, Jiahao Liu, Yaou He, Kunlun Wang, Yongjun Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System” |
title | Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System” |
title_full | Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System” |
title_fullStr | Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System” |
title_full_unstemmed | Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System” |
title_short | Primary Categorizing and Masking Cerebral Small Vessel Disease Based on “Deep Learning System” |
title_sort | primary categorizing and masking cerebral small vessel disease based on “deep learning system” |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7261942/ https://www.ncbi.nlm.nih.gov/pubmed/32523523 http://dx.doi.org/10.3389/fninf.2020.00017 |
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