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Substrate recognition by a bifunctional GH30‐7 xylanase B from Talaromyces cellulolyticus
Xylanase B, a member of subfamily 7 of the GH30 (glycoside hydrolase family 30) from Talaromyces cellulolyticus (TcXyn30B), is a bifunctional enzyme with glucuronoxylanase and xylobiohydrolase activities. In the present study, crystal structures of the native enzyme and the enzyme–product complex of...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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John Wiley and Sons Inc.
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7262913/ https://www.ncbi.nlm.nih.gov/pubmed/32359208 http://dx.doi.org/10.1002/2211-5463.12873 |
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author | Nakamichi, Yusuke Watanabe, Masahiro Matsushika, Akinori Inoue, Hiroyuki |
author_facet | Nakamichi, Yusuke Watanabe, Masahiro Matsushika, Akinori Inoue, Hiroyuki |
author_sort | Nakamichi, Yusuke |
collection | PubMed |
description | Xylanase B, a member of subfamily 7 of the GH30 (glycoside hydrolase family 30) from Talaromyces cellulolyticus (TcXyn30B), is a bifunctional enzyme with glucuronoxylanase and xylobiohydrolase activities. In the present study, crystal structures of the native enzyme and the enzyme–product complex of TcXyn30B expressed in Pichia pastoris were determined at resolutions of 1.60 and 1.65 Å, respectively. The enzyme complexed with 2(2)‐(4‐O‐methyl‐α‐d‐glucuronyl)‐xylobiose (U(4m2)X) revealed that TcXyn30B strictly recognizes both the C‐6 carboxyl group and the 4‐O‐methyl group of the 4‐O‐methyl‐α‐d‐glucuronyl side chain by the conserved residues in GH30‐7 endoxylanases. The crystal structure and site‐directed mutagenesis indicated that Asn‐93 on the β2‐α2‐loop interacts with the non‐reducing end of the xylose residue at subsite‐2 and is likely to be involved in xylobiohydrolase activity. These findings provide structural insight into the mechanisms of substrate recognition of GH30‐7 glucuronoxylanase and xylobiohydrolase. |
format | Online Article Text |
id | pubmed-7262913 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72629132020-06-03 Substrate recognition by a bifunctional GH30‐7 xylanase B from Talaromyces cellulolyticus Nakamichi, Yusuke Watanabe, Masahiro Matsushika, Akinori Inoue, Hiroyuki FEBS Open Bio Research Articles Xylanase B, a member of subfamily 7 of the GH30 (glycoside hydrolase family 30) from Talaromyces cellulolyticus (TcXyn30B), is a bifunctional enzyme with glucuronoxylanase and xylobiohydrolase activities. In the present study, crystal structures of the native enzyme and the enzyme–product complex of TcXyn30B expressed in Pichia pastoris were determined at resolutions of 1.60 and 1.65 Å, respectively. The enzyme complexed with 2(2)‐(4‐O‐methyl‐α‐d‐glucuronyl)‐xylobiose (U(4m2)X) revealed that TcXyn30B strictly recognizes both the C‐6 carboxyl group and the 4‐O‐methyl group of the 4‐O‐methyl‐α‐d‐glucuronyl side chain by the conserved residues in GH30‐7 endoxylanases. The crystal structure and site‐directed mutagenesis indicated that Asn‐93 on the β2‐α2‐loop interacts with the non‐reducing end of the xylose residue at subsite‐2 and is likely to be involved in xylobiohydrolase activity. These findings provide structural insight into the mechanisms of substrate recognition of GH30‐7 glucuronoxylanase and xylobiohydrolase. John Wiley and Sons Inc. 2020-05-22 /pmc/articles/PMC7262913/ /pubmed/32359208 http://dx.doi.org/10.1002/2211-5463.12873 Text en © 2020 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Nakamichi, Yusuke Watanabe, Masahiro Matsushika, Akinori Inoue, Hiroyuki Substrate recognition by a bifunctional GH30‐7 xylanase B from Talaromyces cellulolyticus |
title | Substrate recognition by a bifunctional GH30‐7 xylanase B from Talaromyces cellulolyticus
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title_full | Substrate recognition by a bifunctional GH30‐7 xylanase B from Talaromyces cellulolyticus
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title_fullStr | Substrate recognition by a bifunctional GH30‐7 xylanase B from Talaromyces cellulolyticus
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title_full_unstemmed | Substrate recognition by a bifunctional GH30‐7 xylanase B from Talaromyces cellulolyticus
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title_short | Substrate recognition by a bifunctional GH30‐7 xylanase B from Talaromyces cellulolyticus
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title_sort | substrate recognition by a bifunctional gh30‐7 xylanase b from talaromyces cellulolyticus |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7262913/ https://www.ncbi.nlm.nih.gov/pubmed/32359208 http://dx.doi.org/10.1002/2211-5463.12873 |
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