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Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of Picrophilus torridus and Elucidation of Its Interacting Partners

Nascent polypeptide-associated complex (NAC) is a ribosome-associated molecular chaperone which is present only in archaea and eukaryotes. The primary function of NAC is to shield the newly synthesized polypeptide chains from inappropriate interactions with the cytosolic factors. Besides that, NAC h...

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Autores principales: Singhal, Neelja, Sharma, Archana, Kumari, Shobha, Garg, Anjali, Rai, Ruchica, Singh, Nirpendra, Kumar, Manish, Goel, Manisha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7264160/
https://www.ncbi.nlm.nih.gov/pubmed/32528429
http://dx.doi.org/10.3389/fmicb.2020.00915
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author Singhal, Neelja
Sharma, Archana
Kumari, Shobha
Garg, Anjali
Rai, Ruchica
Singh, Nirpendra
Kumar, Manish
Goel, Manisha
author_facet Singhal, Neelja
Sharma, Archana
Kumari, Shobha
Garg, Anjali
Rai, Ruchica
Singh, Nirpendra
Kumar, Manish
Goel, Manisha
author_sort Singhal, Neelja
collection PubMed
description Nascent polypeptide-associated complex (NAC) is a ribosome-associated molecular chaperone which is present only in archaea and eukaryotes. The primary function of NAC is to shield the newly synthesized polypeptide chains from inappropriate interactions with the cytosolic factors. Besides that, NAC has been implicated in diverse biological functions, which suggest that it might be a multifunctional protein. An elaborate study on NAC can provide useful information on protein folding in extreme conditions in which many archaea grow. Thus, in the present study, we have studied the biophysical and the biochemical characteristics of NAC of Picrophilus torridus, an extreme thermoacidophilic archaeon. The study of protein–protein interactions and binding partners of a protein provides useful insights into the new/unreported roles of a protein. Thus, in this study, we have identified the binding partners of NAC in P. torridus. The NAC protein of P. torridus was cloned, expressed, and purified, and its binding partners were isolated by a pull down assay followed by identification with liquid chromatography–mass spectrometry. To the best of our knowledge, this is the first report on the biophysical and the biochemical characterization of NAC from P. toridus and the identification of its interacting partners.
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spelling pubmed-72641602020-06-10 Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of Picrophilus torridus and Elucidation of Its Interacting Partners Singhal, Neelja Sharma, Archana Kumari, Shobha Garg, Anjali Rai, Ruchica Singh, Nirpendra Kumar, Manish Goel, Manisha Front Microbiol Microbiology Nascent polypeptide-associated complex (NAC) is a ribosome-associated molecular chaperone which is present only in archaea and eukaryotes. The primary function of NAC is to shield the newly synthesized polypeptide chains from inappropriate interactions with the cytosolic factors. Besides that, NAC has been implicated in diverse biological functions, which suggest that it might be a multifunctional protein. An elaborate study on NAC can provide useful information on protein folding in extreme conditions in which many archaea grow. Thus, in the present study, we have studied the biophysical and the biochemical characteristics of NAC of Picrophilus torridus, an extreme thermoacidophilic archaeon. The study of protein–protein interactions and binding partners of a protein provides useful insights into the new/unreported roles of a protein. Thus, in this study, we have identified the binding partners of NAC in P. torridus. The NAC protein of P. torridus was cloned, expressed, and purified, and its binding partners were isolated by a pull down assay followed by identification with liquid chromatography–mass spectrometry. To the best of our knowledge, this is the first report on the biophysical and the biochemical characterization of NAC from P. toridus and the identification of its interacting partners. Frontiers Media S.A. 2020-05-26 /pmc/articles/PMC7264160/ /pubmed/32528429 http://dx.doi.org/10.3389/fmicb.2020.00915 Text en Copyright © 2020 Singhal, Sharma, Kumari, Garg, Rai, Singh, Kumar and Goel. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Singhal, Neelja
Sharma, Archana
Kumari, Shobha
Garg, Anjali
Rai, Ruchica
Singh, Nirpendra
Kumar, Manish
Goel, Manisha
Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of Picrophilus torridus and Elucidation of Its Interacting Partners
title Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of Picrophilus torridus and Elucidation of Its Interacting Partners
title_full Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of Picrophilus torridus and Elucidation of Its Interacting Partners
title_fullStr Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of Picrophilus torridus and Elucidation of Its Interacting Partners
title_full_unstemmed Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of Picrophilus torridus and Elucidation of Its Interacting Partners
title_short Biophysical and Biochemical Characterization of Nascent Polypeptide-Associated Complex of Picrophilus torridus and Elucidation of Its Interacting Partners
title_sort biophysical and biochemical characterization of nascent polypeptide-associated complex of picrophilus torridus and elucidation of its interacting partners
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7264160/
https://www.ncbi.nlm.nih.gov/pubmed/32528429
http://dx.doi.org/10.3389/fmicb.2020.00915
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