Cargando…
Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data
Individualizing physiological models to a patient can enable patient-specific monitoring and treatment in critical care environments. However, this task often presents a unique “practical identifiability” challenge due to the conflict between model complexity and data scarcity. Regularization provid...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7264422/ https://www.ncbi.nlm.nih.gov/pubmed/32528303 http://dx.doi.org/10.3389/fphys.2020.00452 |
_version_ | 1783540972625330176 |
---|---|
author | Tivay, Ali Jin, Xin Lo, Alex Kai-Yuan Scully, Christopher G. Hahn, Jin-Oh |
author_facet | Tivay, Ali Jin, Xin Lo, Alex Kai-Yuan Scully, Christopher G. Hahn, Jin-Oh |
author_sort | Tivay, Ali |
collection | PubMed |
description | Individualizing physiological models to a patient can enable patient-specific monitoring and treatment in critical care environments. However, this task often presents a unique “practical identifiability” challenge due to the conflict between model complexity and data scarcity. Regularization provides an established framework to cope with this conflict by compensating for data scarcity with prior knowledge. However, regularization has not been widely pursued in individualizing physiological models to facilitate patient-specific critical care. Thus, the goal of this work is to garner potentially generalizable insight into the practical use of regularization in individualizing a complex physiological model using scarce data by investigating its effect in a clinically significant critical care case study of blood volume kinetics and cardiovascular hemodynamics in hemorrhage and circulatory resuscitation. We construct a population-average model as prior knowledge and individualize the physiological model via regularization to illustrate that regularization can be effective in individualizing a physiological model to learn salient individual-specific characteristics (resulting in the goodness of fit to individual-specific data) while restricting unnecessary deviations from the population-average model (achieving practical identifiability). We also illustrate that regularization yields parsimonious individualization of only sensitive parameters as well as adequate physiological plausibility and relevance in predicting internal physiological states. |
format | Online Article Text |
id | pubmed-7264422 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72644222020-06-10 Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data Tivay, Ali Jin, Xin Lo, Alex Kai-Yuan Scully, Christopher G. Hahn, Jin-Oh Front Physiol Physiology Individualizing physiological models to a patient can enable patient-specific monitoring and treatment in critical care environments. However, this task often presents a unique “practical identifiability” challenge due to the conflict between model complexity and data scarcity. Regularization provides an established framework to cope with this conflict by compensating for data scarcity with prior knowledge. However, regularization has not been widely pursued in individualizing physiological models to facilitate patient-specific critical care. Thus, the goal of this work is to garner potentially generalizable insight into the practical use of regularization in individualizing a complex physiological model using scarce data by investigating its effect in a clinically significant critical care case study of blood volume kinetics and cardiovascular hemodynamics in hemorrhage and circulatory resuscitation. We construct a population-average model as prior knowledge and individualize the physiological model via regularization to illustrate that regularization can be effective in individualizing a physiological model to learn salient individual-specific characteristics (resulting in the goodness of fit to individual-specific data) while restricting unnecessary deviations from the population-average model (achieving practical identifiability). We also illustrate that regularization yields parsimonious individualization of only sensitive parameters as well as adequate physiological plausibility and relevance in predicting internal physiological states. Frontiers Media S.A. 2020-05-26 /pmc/articles/PMC7264422/ /pubmed/32528303 http://dx.doi.org/10.3389/fphys.2020.00452 Text en Copyright © 2020 Tivay, Jin, Lo, Scully and Hahn. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Physiology Tivay, Ali Jin, Xin Lo, Alex Kai-Yuan Scully, Christopher G. Hahn, Jin-Oh Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data |
title | Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data |
title_full | Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data |
title_fullStr | Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data |
title_full_unstemmed | Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data |
title_short | Practical Use of Regularization in Individualizing a Mathematical Model of Cardiovascular Hemodynamics Using Scarce Data |
title_sort | practical use of regularization in individualizing a mathematical model of cardiovascular hemodynamics using scarce data |
topic | Physiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7264422/ https://www.ncbi.nlm.nih.gov/pubmed/32528303 http://dx.doi.org/10.3389/fphys.2020.00452 |
work_keys_str_mv | AT tivayali practicaluseofregularizationinindividualizingamathematicalmodelofcardiovascularhemodynamicsusingscarcedata AT jinxin practicaluseofregularizationinindividualizingamathematicalmodelofcardiovascularhemodynamicsusingscarcedata AT loalexkaiyuan practicaluseofregularizationinindividualizingamathematicalmodelofcardiovascularhemodynamicsusingscarcedata AT scullychristopherg practicaluseofregularizationinindividualizingamathematicalmodelofcardiovascularhemodynamicsusingscarcedata AT hahnjinoh practicaluseofregularizationinindividualizingamathematicalmodelofcardiovascularhemodynamicsusingscarcedata |