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Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression

The thermophilic archaeon Sulfolobus acidocaldarius can use different carbon sources for growth, including the pentoses D-xylose and L-arabinose. In this study, we identified the activator XylR (saci_2116) responsible for the transcriptional regulation of the pentose transporter and pentose metaboli...

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Autores principales: van der Kolk, Nienke, Wagner, Alexander, Wagner, Michaela, Waßmer, Bianca, Siebers, Bettina, Albers, Sonja-Verena
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7264815/
https://www.ncbi.nlm.nih.gov/pubmed/32528450
http://dx.doi.org/10.3389/fmicb.2020.01066
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author van der Kolk, Nienke
Wagner, Alexander
Wagner, Michaela
Waßmer, Bianca
Siebers, Bettina
Albers, Sonja-Verena
author_facet van der Kolk, Nienke
Wagner, Alexander
Wagner, Michaela
Waßmer, Bianca
Siebers, Bettina
Albers, Sonja-Verena
author_sort van der Kolk, Nienke
collection PubMed
description The thermophilic archaeon Sulfolobus acidocaldarius can use different carbon sources for growth, including the pentoses D-xylose and L-arabinose. In this study, we identified the activator XylR (saci_2116) responsible for the transcriptional regulation of the pentose transporter and pentose metabolizing genes in S. acidocaldarius. A xylR deletion mutant showed growth retardation on D-xylose/L-arabinose containing media and the lack of transcription of the respective ABC transporter. In contrast to so far used promoters for expression in S. acidocaldarius, the xylR responsive promoters have a very low background activity. Finally, two XylR dependent promoters next to the long-established maltose inducible promotor were used to construct a high-throughput expression vector system for S. acidocaldarius to efficiently clone and express proteins in S. acidocaldarius.
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spelling pubmed-72648152020-06-10 Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression van der Kolk, Nienke Wagner, Alexander Wagner, Michaela Waßmer, Bianca Siebers, Bettina Albers, Sonja-Verena Front Microbiol Microbiology The thermophilic archaeon Sulfolobus acidocaldarius can use different carbon sources for growth, including the pentoses D-xylose and L-arabinose. In this study, we identified the activator XylR (saci_2116) responsible for the transcriptional regulation of the pentose transporter and pentose metabolizing genes in S. acidocaldarius. A xylR deletion mutant showed growth retardation on D-xylose/L-arabinose containing media and the lack of transcription of the respective ABC transporter. In contrast to so far used promoters for expression in S. acidocaldarius, the xylR responsive promoters have a very low background activity. Finally, two XylR dependent promoters next to the long-established maltose inducible promotor were used to construct a high-throughput expression vector system for S. acidocaldarius to efficiently clone and express proteins in S. acidocaldarius. Frontiers Media S.A. 2020-05-26 /pmc/articles/PMC7264815/ /pubmed/32528450 http://dx.doi.org/10.3389/fmicb.2020.01066 Text en Copyright © 2020 van der Kolk, Wagner, Wagner, Waßmer, Siebers and Albers. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
van der Kolk, Nienke
Wagner, Alexander
Wagner, Michaela
Waßmer, Bianca
Siebers, Bettina
Albers, Sonja-Verena
Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression
title Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression
title_full Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression
title_fullStr Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression
title_full_unstemmed Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression
title_short Identification of XylR, the Activator of Arabinose/Xylose Inducible Regulon in Sulfolobus acidocaldarius and Its Application for Homologous Protein Expression
title_sort identification of xylr, the activator of arabinose/xylose inducible regulon in sulfolobus acidocaldarius and its application for homologous protein expression
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7264815/
https://www.ncbi.nlm.nih.gov/pubmed/32528450
http://dx.doi.org/10.3389/fmicb.2020.01066
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