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RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2
The pandemic coronavirus SARS‐CoV‐2 in the world has caused a large infected population suffering from COVID‐19. To curb the spreading of the virus, WHO urgently demanded an extension of screening and testing; thus, a rapid and simple diagnostic method is needed. We applied a reverse transcription‐l...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7264870/ https://www.ncbi.nlm.nih.gov/pubmed/32333644 http://dx.doi.org/10.1111/1751-7915.13586 |
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author | Huang, Wei E. Lim, Boon Hsu, Chia‐Chen Xiong, Dan Wu, Wei Yu, Yejiong Jia, Huidong Wang, Yun Zeng, Yida Ji, Mengmeng Chang, Hong Zhang, Xiuming Wang, Hui Cui, Zhanfeng |
author_facet | Huang, Wei E. Lim, Boon Hsu, Chia‐Chen Xiong, Dan Wu, Wei Yu, Yejiong Jia, Huidong Wang, Yun Zeng, Yida Ji, Mengmeng Chang, Hong Zhang, Xiuming Wang, Hui Cui, Zhanfeng |
author_sort | Huang, Wei E. |
collection | PubMed |
description | The pandemic coronavirus SARS‐CoV‐2 in the world has caused a large infected population suffering from COVID‐19. To curb the spreading of the virus, WHO urgently demanded an extension of screening and testing; thus, a rapid and simple diagnostic method is needed. We applied a reverse transcription‐loop‐mediated isothermal amplification (RT‐LAMP) to achieve the detection of SARS‐CoV‐2 in 30 min. We designed four sets of LAMP primers (6 primers in each set), targeting the viral RNA of SARS‐CoV‐2 in the regions of orf1ab, S gene and N gene. A colorimetric change was used to report the results, which enables the outcome of viral RNA amplification to be read by the naked eye without the need of expensive or dedicated instrument. The sensitivity can be 80 copies of viral RNA per ml in a sample. We validated the RT‐LAMP method in a hospital in China, employing 16 clinic samples with 8 positives and 8 negatives. The testing results are consistent with the conventional RT‐qPCR. In addition, we also show that one‐step process without RNA extraction is feasible to achieve RNA amplification directly from a sample. This rapid, simple and sensitive RT‐LAMP method paves a way for a large screening at public domain and hospitals, particularly regional hospitals and medical centres in rural areas. |
format | Online Article Text |
id | pubmed-7264870 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72648702020-06-03 RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2 Huang, Wei E. Lim, Boon Hsu, Chia‐Chen Xiong, Dan Wu, Wei Yu, Yejiong Jia, Huidong Wang, Yun Zeng, Yida Ji, Mengmeng Chang, Hong Zhang, Xiuming Wang, Hui Cui, Zhanfeng Microb Biotechnol Research Articles The pandemic coronavirus SARS‐CoV‐2 in the world has caused a large infected population suffering from COVID‐19. To curb the spreading of the virus, WHO urgently demanded an extension of screening and testing; thus, a rapid and simple diagnostic method is needed. We applied a reverse transcription‐loop‐mediated isothermal amplification (RT‐LAMP) to achieve the detection of SARS‐CoV‐2 in 30 min. We designed four sets of LAMP primers (6 primers in each set), targeting the viral RNA of SARS‐CoV‐2 in the regions of orf1ab, S gene and N gene. A colorimetric change was used to report the results, which enables the outcome of viral RNA amplification to be read by the naked eye without the need of expensive or dedicated instrument. The sensitivity can be 80 copies of viral RNA per ml in a sample. We validated the RT‐LAMP method in a hospital in China, employing 16 clinic samples with 8 positives and 8 negatives. The testing results are consistent with the conventional RT‐qPCR. In addition, we also show that one‐step process without RNA extraction is feasible to achieve RNA amplification directly from a sample. This rapid, simple and sensitive RT‐LAMP method paves a way for a large screening at public domain and hospitals, particularly regional hospitals and medical centres in rural areas. John Wiley and Sons Inc. 2020-04-25 /pmc/articles/PMC7264870/ /pubmed/32333644 http://dx.doi.org/10.1111/1751-7915.13586 Text en © 2020 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Huang, Wei E. Lim, Boon Hsu, Chia‐Chen Xiong, Dan Wu, Wei Yu, Yejiong Jia, Huidong Wang, Yun Zeng, Yida Ji, Mengmeng Chang, Hong Zhang, Xiuming Wang, Hui Cui, Zhanfeng RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2 |
title | RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2 |
title_full | RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2 |
title_fullStr | RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2 |
title_full_unstemmed | RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2 |
title_short | RT‐LAMP for rapid diagnosis of coronavirus SARS‐CoV‐2 |
title_sort | rt‐lamp for rapid diagnosis of coronavirus sars‐cov‐2 |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7264870/ https://www.ncbi.nlm.nih.gov/pubmed/32333644 http://dx.doi.org/10.1111/1751-7915.13586 |
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