Cargando…
Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows
BACKGROUND: Single-cell RNA sequencing has been widely adopted to estimate the cellular composition of heterogeneous tissues and obtain transcriptional profiles of individual cells. Multiple approaches for optimal sample dissociation and storage of single cells have been proposed as have single-nucl...
Autores principales: | Denisenko, Elena, Guo, Belinda B., Jones, Matthew, Hou, Rui, de Kock, Leanne, Lassmann, Timo, Poppe, Daniel, Clément, Olivier, Simmons, Rebecca K., Lister, Ryan, Forrest, Alistair R. R. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7265231/ https://www.ncbi.nlm.nih.gov/pubmed/32487174 http://dx.doi.org/10.1186/s13059-020-02048-6 |
Ejemplares similares
-
Dissociation protocols used for sarcoma tissues bias the transcriptome observed in single-cell and single-nucleus RNA sequencing
por: Truong, Danh D., et al.
Publicado: (2023) -
Automated Workflow for Preparation of cDNA for Cap Analysis of Gene Expression on a Single Molecule Sequencer
por: Itoh, Masayoshi, et al.
Publicado: (2012) -
Massively-parallel single nucleus RNA-seq with DroNc-seq
por: Habib, Naomi, et al.
Publicado: (2017) -
scMatch: a single-cell gene expression profile annotation tool using reference datasets
por: Hou, Rui, et al.
Publicado: (2019) -
Characterization of transcript enrichment and detection bias in single-nucleus RNA-seq for mapping of distinct human adipocyte lineages
por: Gupta, Anushka, et al.
Publicado: (2022)