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SST gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis

Aberrant DNA methylation is often involved in carcinogenesis. Our initial goal was to identify DNA methylation biomarkers associated with pancreatic cancer. A genomewide methylation study was performed on DNA from pancreatic ductal adenocarcinoma (PDAC) and endocrine pancreas tumors. Validation of D...

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Autores principales: Manoochehri, Mehdi, Wu, Yenan, Giese, Nathalia A., Strobel, Oliver, Kutschmann, Stefanie, Haller, Florian, Hoheisel, Jörg D., Moskalev, Evgeny A., Hackert, Thilo, Bauer, Andrea S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7266283/
https://www.ncbi.nlm.nih.gov/pubmed/32243066
http://dx.doi.org/10.1002/1878-0261.12684
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author Manoochehri, Mehdi
Wu, Yenan
Giese, Nathalia A.
Strobel, Oliver
Kutschmann, Stefanie
Haller, Florian
Hoheisel, Jörg D.
Moskalev, Evgeny A.
Hackert, Thilo
Bauer, Andrea S.
author_facet Manoochehri, Mehdi
Wu, Yenan
Giese, Nathalia A.
Strobel, Oliver
Kutschmann, Stefanie
Haller, Florian
Hoheisel, Jörg D.
Moskalev, Evgeny A.
Hackert, Thilo
Bauer, Andrea S.
author_sort Manoochehri, Mehdi
collection PubMed
description Aberrant DNA methylation is often involved in carcinogenesis. Our initial goal was to identify DNA methylation biomarkers associated with pancreatic cancer. A genomewide methylation study was performed on DNA from pancreatic ductal adenocarcinoma (PDAC) and endocrine pancreas tumors. Validation of DNA methylation patterns and concomitant alterations in expression of gene candidates was performed on patient samples and pancreatic cancer cell lines. Furthermore, validation was done on independent data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). Finally, droplet digital PCR was employed to detect DNA methylation marks in cell‐free (cf) DNA isolated from plasma samples of PDAC patients and cancer‐free blood donors. Hypermethylation of the SST gene (encoding somatostatin) and concomitant downregulation of its expression were discovered in PDAC and endocrine tumor tissues while not being present in chronic pancreatitis (inflamed) tissues and normal pancreas. Fittingly, treatment with a somatostatin agonist (octreotide) reduced cell proliferation and migration of pancreatic cancer cells. Diagnostic performance of SST methylation in a receiver operating characteristic curve analysis was 100% and 89% for tissue and plasma samples, respectively. A large body of TCGA and GEO data confirmed SST hypermethylation and downregulation in PDAC and showed a similar effect in a broad spectrum of other tumor entities. SST promoter methylation represents a sensitive and promising molecular, pan‐cancer biomarker detectable in tumor tissue, and liquid biopsy samples.
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spelling pubmed-72662832020-06-03 SST gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis Manoochehri, Mehdi Wu, Yenan Giese, Nathalia A. Strobel, Oliver Kutschmann, Stefanie Haller, Florian Hoheisel, Jörg D. Moskalev, Evgeny A. Hackert, Thilo Bauer, Andrea S. Mol Oncol Research Articles Aberrant DNA methylation is often involved in carcinogenesis. Our initial goal was to identify DNA methylation biomarkers associated with pancreatic cancer. A genomewide methylation study was performed on DNA from pancreatic ductal adenocarcinoma (PDAC) and endocrine pancreas tumors. Validation of DNA methylation patterns and concomitant alterations in expression of gene candidates was performed on patient samples and pancreatic cancer cell lines. Furthermore, validation was done on independent data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). Finally, droplet digital PCR was employed to detect DNA methylation marks in cell‐free (cf) DNA isolated from plasma samples of PDAC patients and cancer‐free blood donors. Hypermethylation of the SST gene (encoding somatostatin) and concomitant downregulation of its expression were discovered in PDAC and endocrine tumor tissues while not being present in chronic pancreatitis (inflamed) tissues and normal pancreas. Fittingly, treatment with a somatostatin agonist (octreotide) reduced cell proliferation and migration of pancreatic cancer cells. Diagnostic performance of SST methylation in a receiver operating characteristic curve analysis was 100% and 89% for tissue and plasma samples, respectively. A large body of TCGA and GEO data confirmed SST hypermethylation and downregulation in PDAC and showed a similar effect in a broad spectrum of other tumor entities. SST promoter methylation represents a sensitive and promising molecular, pan‐cancer biomarker detectable in tumor tissue, and liquid biopsy samples. John Wiley and Sons Inc. 2020-04-14 2020-06 /pmc/articles/PMC7266283/ /pubmed/32243066 http://dx.doi.org/10.1002/1878-0261.12684 Text en © 2020 The Authors. Published by FEBS Press and John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Manoochehri, Mehdi
Wu, Yenan
Giese, Nathalia A.
Strobel, Oliver
Kutschmann, Stefanie
Haller, Florian
Hoheisel, Jörg D.
Moskalev, Evgeny A.
Hackert, Thilo
Bauer, Andrea S.
SST gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis
title SST gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis
title_full SST gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis
title_fullStr SST gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis
title_full_unstemmed SST gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis
title_short SST gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis
title_sort sst gene hypermethylation acts as a pan‐cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood‐based diagnosis
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7266283/
https://www.ncbi.nlm.nih.gov/pubmed/32243066
http://dx.doi.org/10.1002/1878-0261.12684
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