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Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season

BACKGROUND: Despite the early development of Google Flu Trends in 2009, standards for digital epidemiology methods have not been established and research from European countries is scarce. AIM: In this article, we study the use of web search queries to monitor influenza-like illness (ILI) rates in t...

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Autores principales: Schneider, Paul P, van Gool, Christel JAW, Spreeuwenberg, Peter, Hooiveld, Mariëtte, Donker, Gé A, Barnett, David J, Paget, John
Formato: Online Artículo Texto
Lenguaje:English
Publicado: European Centre for Disease Prevention and Control (ECDC) 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7268271/
https://www.ncbi.nlm.nih.gov/pubmed/32489174
http://dx.doi.org/10.2807/1560-7917.ES.2020.25.21.1900221
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author Schneider, Paul P
van Gool, Christel JAW
Spreeuwenberg, Peter
Hooiveld, Mariëtte
Donker, Gé A
Barnett, David J
Paget, John
author_facet Schneider, Paul P
van Gool, Christel JAW
Spreeuwenberg, Peter
Hooiveld, Mariëtte
Donker, Gé A
Barnett, David J
Paget, John
author_sort Schneider, Paul P
collection PubMed
description BACKGROUND: Despite the early development of Google Flu Trends in 2009, standards for digital epidemiology methods have not been established and research from European countries is scarce. AIM: In this article, we study the use of web search queries to monitor influenza-like illness (ILI) rates in the Netherlands in real time. METHODS: In this retrospective analysis, we simulated the weekly use of a prediction model for estimating the then-current ILI incidence across the 2017/18 influenza season solely based on Google search query data. We used weekly ILI data as reported to The European Surveillance System (TESSY)  each week, and we removed the then-last 4 weeks from our dataset. We then fitted a prediction model based on the then-most-recent search query data from Google Trends to fill the 4-week gap (‘Nowcasting’). Lasso regression, in combination with cross-validation, was applied to select predictors and to fit the 52 models, one for each week of the season. RESULTS: The models provided accurate predictions with a mean and maximum absolute error of 1.40 (95% confidence interval: 1.09–1.75) and 6.36 per 10,000 population. The onset, peak and end of the epidemic were predicted with an error of 1, 3 and 2 weeks, respectively. The number of search terms retained as predictors ranged from three to five, with one keyword, ‘griep’ (‘flu’), having the most weight in all models. DISCUSSION: This study demonstrates the feasibility of accurate, real-time ILI incidence predictions in the Netherlands using Google search query data.
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spelling pubmed-72682712020-06-04 Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season Schneider, Paul P van Gool, Christel JAW Spreeuwenberg, Peter Hooiveld, Mariëtte Donker, Gé A Barnett, David J Paget, John Euro Surveill Research BACKGROUND: Despite the early development of Google Flu Trends in 2009, standards for digital epidemiology methods have not been established and research from European countries is scarce. AIM: In this article, we study the use of web search queries to monitor influenza-like illness (ILI) rates in the Netherlands in real time. METHODS: In this retrospective analysis, we simulated the weekly use of a prediction model for estimating the then-current ILI incidence across the 2017/18 influenza season solely based on Google search query data. We used weekly ILI data as reported to The European Surveillance System (TESSY)  each week, and we removed the then-last 4 weeks from our dataset. We then fitted a prediction model based on the then-most-recent search query data from Google Trends to fill the 4-week gap (‘Nowcasting’). Lasso regression, in combination with cross-validation, was applied to select predictors and to fit the 52 models, one for each week of the season. RESULTS: The models provided accurate predictions with a mean and maximum absolute error of 1.40 (95% confidence interval: 1.09–1.75) and 6.36 per 10,000 population. The onset, peak and end of the epidemic were predicted with an error of 1, 3 and 2 weeks, respectively. The number of search terms retained as predictors ranged from three to five, with one keyword, ‘griep’ (‘flu’), having the most weight in all models. DISCUSSION: This study demonstrates the feasibility of accurate, real-time ILI incidence predictions in the Netherlands using Google search query data. European Centre for Disease Prevention and Control (ECDC) 2020-05-28 /pmc/articles/PMC7268271/ /pubmed/32489174 http://dx.doi.org/10.2807/1560-7917.ES.2020.25.21.1900221 Text en This article is copyright of the authors or their affiliated institutions, 2020. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY 4.0) Licence. You may share and adapt the material, but must give appropriate credit to the source, provide a link to the licence, and indicate if changes were made.
spellingShingle Research
Schneider, Paul P
van Gool, Christel JAW
Spreeuwenberg, Peter
Hooiveld, Mariëtte
Donker, Gé A
Barnett, David J
Paget, John
Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season
title Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season
title_full Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season
title_fullStr Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season
title_full_unstemmed Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season
title_short Using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, Netherlands, 2017/18 influenza season
title_sort using web search queries to monitor influenza-like illness: an exploratory retrospective analysis, netherlands, 2017/18 influenza season
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7268271/
https://www.ncbi.nlm.nih.gov/pubmed/32489174
http://dx.doi.org/10.2807/1560-7917.ES.2020.25.21.1900221
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