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Enhancing Multi-Center Generalization of Machine Learning-Based Depression Diagnosis From Resting-State fMRI

Resting-state fMRI has the potential to help doctors detect abnormal behavior in brain activity and to diagnose patients with depression. However, resting-state fMRI has a bias depending on the scanner site, which makes it difficult to diagnose depression at a new site. In this paper, we propose met...

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Autores principales: Nakano, Takashi, Takamura, Masahiro, Ichikawa, Naho, Okada, Go, Okamoto, Yasumasa, Yamada, Makiko, Suhara, Tetsuya, Yamawaki, Shigeto, Yoshimoto, Junichiro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7270328/
https://www.ncbi.nlm.nih.gov/pubmed/32547427
http://dx.doi.org/10.3389/fpsyt.2020.00400
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author Nakano, Takashi
Takamura, Masahiro
Ichikawa, Naho
Okada, Go
Okamoto, Yasumasa
Yamada, Makiko
Suhara, Tetsuya
Yamawaki, Shigeto
Yoshimoto, Junichiro
author_facet Nakano, Takashi
Takamura, Masahiro
Ichikawa, Naho
Okada, Go
Okamoto, Yasumasa
Yamada, Makiko
Suhara, Tetsuya
Yamawaki, Shigeto
Yoshimoto, Junichiro
author_sort Nakano, Takashi
collection PubMed
description Resting-state fMRI has the potential to help doctors detect abnormal behavior in brain activity and to diagnose patients with depression. However, resting-state fMRI has a bias depending on the scanner site, which makes it difficult to diagnose depression at a new site. In this paper, we propose methods to improve the performance of the diagnosis of major depressive disorder (MDD) at an independent site by reducing the site bias effects using regression. For this, we used a subgroup of healthy subjects of the independent site to regress out site bias. We further improved the classification performance of patients with depression by focusing on melancholic depressive disorder. Our proposed methods would be useful to apply depression classifiers to subjects at completely new sites.
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spelling pubmed-72703282020-06-15 Enhancing Multi-Center Generalization of Machine Learning-Based Depression Diagnosis From Resting-State fMRI Nakano, Takashi Takamura, Masahiro Ichikawa, Naho Okada, Go Okamoto, Yasumasa Yamada, Makiko Suhara, Tetsuya Yamawaki, Shigeto Yoshimoto, Junichiro Front Psychiatry Psychiatry Resting-state fMRI has the potential to help doctors detect abnormal behavior in brain activity and to diagnose patients with depression. However, resting-state fMRI has a bias depending on the scanner site, which makes it difficult to diagnose depression at a new site. In this paper, we propose methods to improve the performance of the diagnosis of major depressive disorder (MDD) at an independent site by reducing the site bias effects using regression. For this, we used a subgroup of healthy subjects of the independent site to regress out site bias. We further improved the classification performance of patients with depression by focusing on melancholic depressive disorder. Our proposed methods would be useful to apply depression classifiers to subjects at completely new sites. Frontiers Media S.A. 2020-05-28 /pmc/articles/PMC7270328/ /pubmed/32547427 http://dx.doi.org/10.3389/fpsyt.2020.00400 Text en Copyright © 2020 Nakano, Takamura, Ichikawa, Okada, Okamoto, Yamada, Suhara, Yamawaki and Yoshimoto http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Psychiatry
Nakano, Takashi
Takamura, Masahiro
Ichikawa, Naho
Okada, Go
Okamoto, Yasumasa
Yamada, Makiko
Suhara, Tetsuya
Yamawaki, Shigeto
Yoshimoto, Junichiro
Enhancing Multi-Center Generalization of Machine Learning-Based Depression Diagnosis From Resting-State fMRI
title Enhancing Multi-Center Generalization of Machine Learning-Based Depression Diagnosis From Resting-State fMRI
title_full Enhancing Multi-Center Generalization of Machine Learning-Based Depression Diagnosis From Resting-State fMRI
title_fullStr Enhancing Multi-Center Generalization of Machine Learning-Based Depression Diagnosis From Resting-State fMRI
title_full_unstemmed Enhancing Multi-Center Generalization of Machine Learning-Based Depression Diagnosis From Resting-State fMRI
title_short Enhancing Multi-Center Generalization of Machine Learning-Based Depression Diagnosis From Resting-State fMRI
title_sort enhancing multi-center generalization of machine learning-based depression diagnosis from resting-state fmri
topic Psychiatry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7270328/
https://www.ncbi.nlm.nih.gov/pubmed/32547427
http://dx.doi.org/10.3389/fpsyt.2020.00400
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