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The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis
Mediator 12 (MED12) and MED13 are components of the Mediator multi-protein complex, that facilitates the initial steps of gene transcription. Here, in an Arabidopsis mutant screen, we identify MED12 and MED13 as positive gene regulators, both of which contribute broadly to morc1 de-repressed gene ex...
Autores principales: | , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7271234/ https://www.ncbi.nlm.nih.gov/pubmed/32493925 http://dx.doi.org/10.1038/s41467-020-16651-5 |
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author | Liu, Qikun Bischof, Sylvain Harris, C. Jake Zhong, Zhenhui Zhan, Lingyu Nguyen, Calvin Rashoff, Andrew Barshop, William D. Sun, Fei Feng, Suhua Potok, Magdalena Gallego-Bartolome, Javier Zhai, Jixian Wohlschlegel, James A. Carey, Michael F. Long, Jeffrey A. Jacobsen, Steven E. |
author_facet | Liu, Qikun Bischof, Sylvain Harris, C. Jake Zhong, Zhenhui Zhan, Lingyu Nguyen, Calvin Rashoff, Andrew Barshop, William D. Sun, Fei Feng, Suhua Potok, Magdalena Gallego-Bartolome, Javier Zhai, Jixian Wohlschlegel, James A. Carey, Michael F. Long, Jeffrey A. Jacobsen, Steven E. |
author_sort | Liu, Qikun |
collection | PubMed |
description | Mediator 12 (MED12) and MED13 are components of the Mediator multi-protein complex, that facilitates the initial steps of gene transcription. Here, in an Arabidopsis mutant screen, we identify MED12 and MED13 as positive gene regulators, both of which contribute broadly to morc1 de-repressed gene expression. Both MED12 and MED13 are preferentially required for the expression of genes depleted in active chromatin marks, a chromatin signature shared with morc1 re-activated loci. We further discover that MED12 tends to interact with genes that are responsive to environmental stimuli, including light and radiation. We demonstrate that light-induced transient gene expression depends on MED12, and is accompanied by a concomitant increase in MED12 enrichment during induction. In contrast, the steady-state expression level of these genes show little dependence on MED12, suggesting that MED12 is primarily required to aid the expression of genes in transition from less-active to more active states. |
format | Online Article Text |
id | pubmed-7271234 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-72712342020-06-15 The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis Liu, Qikun Bischof, Sylvain Harris, C. Jake Zhong, Zhenhui Zhan, Lingyu Nguyen, Calvin Rashoff, Andrew Barshop, William D. Sun, Fei Feng, Suhua Potok, Magdalena Gallego-Bartolome, Javier Zhai, Jixian Wohlschlegel, James A. Carey, Michael F. Long, Jeffrey A. Jacobsen, Steven E. Nat Commun Article Mediator 12 (MED12) and MED13 are components of the Mediator multi-protein complex, that facilitates the initial steps of gene transcription. Here, in an Arabidopsis mutant screen, we identify MED12 and MED13 as positive gene regulators, both of which contribute broadly to morc1 de-repressed gene expression. Both MED12 and MED13 are preferentially required for the expression of genes depleted in active chromatin marks, a chromatin signature shared with morc1 re-activated loci. We further discover that MED12 tends to interact with genes that are responsive to environmental stimuli, including light and radiation. We demonstrate that light-induced transient gene expression depends on MED12, and is accompanied by a concomitant increase in MED12 enrichment during induction. In contrast, the steady-state expression level of these genes show little dependence on MED12, suggesting that MED12 is primarily required to aid the expression of genes in transition from less-active to more active states. Nature Publishing Group UK 2020-06-03 /pmc/articles/PMC7271234/ /pubmed/32493925 http://dx.doi.org/10.1038/s41467-020-16651-5 Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Liu, Qikun Bischof, Sylvain Harris, C. Jake Zhong, Zhenhui Zhan, Lingyu Nguyen, Calvin Rashoff, Andrew Barshop, William D. Sun, Fei Feng, Suhua Potok, Magdalena Gallego-Bartolome, Javier Zhai, Jixian Wohlschlegel, James A. Carey, Michael F. Long, Jeffrey A. Jacobsen, Steven E. The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis |
title | The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis |
title_full | The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis |
title_fullStr | The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis |
title_full_unstemmed | The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis |
title_short | The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis |
title_sort | characterization of mediator 12 and 13 as conditional positive gene regulators in arabidopsis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7271234/ https://www.ncbi.nlm.nih.gov/pubmed/32493925 http://dx.doi.org/10.1038/s41467-020-16651-5 |
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