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Prognostic value of KRAS mutation status in colorectal cancer patients: a population-based competing risk analysis
BACKGROUND: To use competing analyses to estimate the prognostic value of KRAS mutation status in colorectal cancer (CRC) patients and to build nomogram for CRC patients who had KRAS testing. METHOD: The cohort was selected from the Surveillance, Epidemiology, and End Results database. Cumulative in...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7271887/ https://www.ncbi.nlm.nih.gov/pubmed/32547859 http://dx.doi.org/10.7717/peerj.9149 |
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author | Dai, Dongjun Wang, Yanmei Zhu, Liyuan Jin, Hongchuan Wang, Xian |
author_facet | Dai, Dongjun Wang, Yanmei Zhu, Liyuan Jin, Hongchuan Wang, Xian |
author_sort | Dai, Dongjun |
collection | PubMed |
description | BACKGROUND: To use competing analyses to estimate the prognostic value of KRAS mutation status in colorectal cancer (CRC) patients and to build nomogram for CRC patients who had KRAS testing. METHOD: The cohort was selected from the Surveillance, Epidemiology, and End Results database. Cumulative incidence function model and multivariate Fine-Gray regression for proportional hazards modeling of the subdistribution hazard (SH) model were used to estimate the prognosis. An SH model based nomogram was built after a variable selection process. The validation of the nomogram was conducted by discrimination and calibration with 1,000 bootstraps. RESULTS: We included 8,983 CRC patients who had KRAS testing. SH model found that KRAS mutant patients had worse CSS than KRAS wild type patients in overall cohort (HR = 1.10 (95% CI [1.04–1.17]), p < 0.05), and in subgroups that comprised stage III CRC (HR = 1.28 (95% CI [1.09–1.49]), p < 0.05) and stage IV CRC (HR = 1.14 (95% CI [1.06–1.23]), p < 0.05), left side colon cancer (HR = 1.28 (95% CI [1.15–1.42]), p < 0.05) and rectal cancer (HR = 1.23 (95% CI [1.07–1.43]), p < 0.05). We built the SH model based nomogram, which showed good accuracy by internal validation of discrimination and calibration. Calibration curves represented good agreement between the nomogram predicted CRC caused death and actual observed CRC caused death. The time dependent area under the curve of receiver operating characteristic curves (AUC) was over 0.75 for the nomogram. CONCLUSION: This is the first population based competing risk study on the association between KRAS mutation status and the CRC prognosis. The mutation of KRAS indicated a poor prognosis of CRC patients. The current competing risk nomogram would help physicians to predict cancer specific death of CRC patients who had KRAS testing. |
format | Online Article Text |
id | pubmed-7271887 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-72718872020-06-15 Prognostic value of KRAS mutation status in colorectal cancer patients: a population-based competing risk analysis Dai, Dongjun Wang, Yanmei Zhu, Liyuan Jin, Hongchuan Wang, Xian PeerJ Epidemiology BACKGROUND: To use competing analyses to estimate the prognostic value of KRAS mutation status in colorectal cancer (CRC) patients and to build nomogram for CRC patients who had KRAS testing. METHOD: The cohort was selected from the Surveillance, Epidemiology, and End Results database. Cumulative incidence function model and multivariate Fine-Gray regression for proportional hazards modeling of the subdistribution hazard (SH) model were used to estimate the prognosis. An SH model based nomogram was built after a variable selection process. The validation of the nomogram was conducted by discrimination and calibration with 1,000 bootstraps. RESULTS: We included 8,983 CRC patients who had KRAS testing. SH model found that KRAS mutant patients had worse CSS than KRAS wild type patients in overall cohort (HR = 1.10 (95% CI [1.04–1.17]), p < 0.05), and in subgroups that comprised stage III CRC (HR = 1.28 (95% CI [1.09–1.49]), p < 0.05) and stage IV CRC (HR = 1.14 (95% CI [1.06–1.23]), p < 0.05), left side colon cancer (HR = 1.28 (95% CI [1.15–1.42]), p < 0.05) and rectal cancer (HR = 1.23 (95% CI [1.07–1.43]), p < 0.05). We built the SH model based nomogram, which showed good accuracy by internal validation of discrimination and calibration. Calibration curves represented good agreement between the nomogram predicted CRC caused death and actual observed CRC caused death. The time dependent area under the curve of receiver operating characteristic curves (AUC) was over 0.75 for the nomogram. CONCLUSION: This is the first population based competing risk study on the association between KRAS mutation status and the CRC prognosis. The mutation of KRAS indicated a poor prognosis of CRC patients. The current competing risk nomogram would help physicians to predict cancer specific death of CRC patients who had KRAS testing. PeerJ Inc. 2020-06-01 /pmc/articles/PMC7271887/ /pubmed/32547859 http://dx.doi.org/10.7717/peerj.9149 Text en © 2020 Dai et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Epidemiology Dai, Dongjun Wang, Yanmei Zhu, Liyuan Jin, Hongchuan Wang, Xian Prognostic value of KRAS mutation status in colorectal cancer patients: a population-based competing risk analysis |
title | Prognostic value of KRAS mutation status in colorectal cancer patients: a population-based competing risk analysis |
title_full | Prognostic value of KRAS mutation status in colorectal cancer patients: a population-based competing risk analysis |
title_fullStr | Prognostic value of KRAS mutation status in colorectal cancer patients: a population-based competing risk analysis |
title_full_unstemmed | Prognostic value of KRAS mutation status in colorectal cancer patients: a population-based competing risk analysis |
title_short | Prognostic value of KRAS mutation status in colorectal cancer patients: a population-based competing risk analysis |
title_sort | prognostic value of kras mutation status in colorectal cancer patients: a population-based competing risk analysis |
topic | Epidemiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7271887/ https://www.ncbi.nlm.nih.gov/pubmed/32547859 http://dx.doi.org/10.7717/peerj.9149 |
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