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Minding the gap in HIV host genetics: opportunities and challenges

Genome-wide association studies (GWAS) have been successful in identifying and confirming novel genetic variants that are associated with diverse HIV phenotypes. However, these studies have predominantly focused on European cohorts. HLA molecules have been consistently associated with HIV outcomes,...

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Autores principales: Gingras, Shanelle N., Tang, David, Tuff, Jeffrey, McLaren, Paul J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7272494/
https://www.ncbi.nlm.nih.gov/pubmed/32409920
http://dx.doi.org/10.1007/s00439-020-02177-9
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author Gingras, Shanelle N.
Tang, David
Tuff, Jeffrey
McLaren, Paul J.
author_facet Gingras, Shanelle N.
Tang, David
Tuff, Jeffrey
McLaren, Paul J.
author_sort Gingras, Shanelle N.
collection PubMed
description Genome-wide association studies (GWAS) have been successful in identifying and confirming novel genetic variants that are associated with diverse HIV phenotypes. However, these studies have predominantly focused on European cohorts. HLA molecules have been consistently associated with HIV outcomes, some of which have been found to be population specific, underscoring the need for diversity in GWAS. Recently, there has been a concerted effort to address this gap that leads to health care (disease prevention, diagnosis, treatment) disparities with marginal improvement. As precision medicine becomes more utilized, non-European individuals will be more and more disadvantaged, as the genetic variants identified in genomic research based on European populations may not accurately reflect that of non-European individuals. Leveraging pre-existing, large, multiethnic cohorts, such as the UK Biobank, 23andMe, and the National Institute of Health’s All of Us Research Program, can contribute in raising genomic research in non-European populations and ultimately lead to better health outcomes.
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spelling pubmed-72724942020-06-15 Minding the gap in HIV host genetics: opportunities and challenges Gingras, Shanelle N. Tang, David Tuff, Jeffrey McLaren, Paul J. Hum Genet Review Genome-wide association studies (GWAS) have been successful in identifying and confirming novel genetic variants that are associated with diverse HIV phenotypes. However, these studies have predominantly focused on European cohorts. HLA molecules have been consistently associated with HIV outcomes, some of which have been found to be population specific, underscoring the need for diversity in GWAS. Recently, there has been a concerted effort to address this gap that leads to health care (disease prevention, diagnosis, treatment) disparities with marginal improvement. As precision medicine becomes more utilized, non-European individuals will be more and more disadvantaged, as the genetic variants identified in genomic research based on European populations may not accurately reflect that of non-European individuals. Leveraging pre-existing, large, multiethnic cohorts, such as the UK Biobank, 23andMe, and the National Institute of Health’s All of Us Research Program, can contribute in raising genomic research in non-European populations and ultimately lead to better health outcomes. Springer Berlin Heidelberg 2020-05-14 2020 /pmc/articles/PMC7272494/ /pubmed/32409920 http://dx.doi.org/10.1007/s00439-020-02177-9 Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Review
Gingras, Shanelle N.
Tang, David
Tuff, Jeffrey
McLaren, Paul J.
Minding the gap in HIV host genetics: opportunities and challenges
title Minding the gap in HIV host genetics: opportunities and challenges
title_full Minding the gap in HIV host genetics: opportunities and challenges
title_fullStr Minding the gap in HIV host genetics: opportunities and challenges
title_full_unstemmed Minding the gap in HIV host genetics: opportunities and challenges
title_short Minding the gap in HIV host genetics: opportunities and challenges
title_sort minding the gap in hiv host genetics: opportunities and challenges
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7272494/
https://www.ncbi.nlm.nih.gov/pubmed/32409920
http://dx.doi.org/10.1007/s00439-020-02177-9
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