Eukaryotic Microbial Communities in Japanese Arable Andisols Investigated by Amplicon Sequencing of 18S rRNA Genes

Compared with the well-studied soil prokaryotic communities, little is known about soil eukaryotic communities. Here, we investigated the eukaryotic community structures in 43 arable soils using amplicon sequencing of 18S rRNA genes. Major taxonomic groups, such as Fungi, Holozoa, and Stramenopiles,...

Descripción completa

Detalles Bibliográficos
Autores principales: Mise, Kazumori, Otsuka, Shigeto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2020
Materias:
Amplicon Sequence Collections
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7272547/
https://www.ncbi.nlm.nih.gov/pubmed/32499366
http://dx.doi.org/10.1128/MRA.00218-20
_version_ 1783542275143368704
author Mise, Kazumori
Otsuka, Shigeto
author_facet Mise, Kazumori
Otsuka, Shigeto
author_sort Mise, Kazumori
collection PubMed
description Compared with the well-studied soil prokaryotic communities, little is known about soil eukaryotic communities. Here, we investigated the eukaryotic community structures in 43 arable soils using amplicon sequencing of 18S rRNA genes. Major taxonomic groups, such as Fungi, Holozoa, and Stramenopiles, were detected in all samples.
format Online
Article
Text
id pubmed-7272547
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-72725472020-06-09 Eukaryotic Microbial Communities in Japanese Arable Andisols Investigated by Amplicon Sequencing of 18S rRNA Genes Mise, Kazumori Otsuka, Shigeto Microbiol Resour Announc Amplicon Sequence Collections Compared with the well-studied soil prokaryotic communities, little is known about soil eukaryotic communities. Here, we investigated the eukaryotic community structures in 43 arable soils using amplicon sequencing of 18S rRNA genes. Major taxonomic groups, such as Fungi, Holozoa, and Stramenopiles, were detected in all samples. American Society for Microbiology 2020-06-04 /pmc/articles/PMC7272547/ /pubmed/32499366 http://dx.doi.org/10.1128/MRA.00218-20 Text en Copyright © 2020 Mise and Otsuka. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Amplicon Sequence Collections
Mise, Kazumori
Otsuka, Shigeto
Eukaryotic Microbial Communities in Japanese Arable Andisols Investigated by Amplicon Sequencing of 18S rRNA Genes
title Eukaryotic Microbial Communities in Japanese Arable Andisols Investigated by Amplicon Sequencing of 18S rRNA Genes
title_full Eukaryotic Microbial Communities in Japanese Arable Andisols Investigated by Amplicon Sequencing of 18S rRNA Genes
title_fullStr Eukaryotic Microbial Communities in Japanese Arable Andisols Investigated by Amplicon Sequencing of 18S rRNA Genes
title_full_unstemmed Eukaryotic Microbial Communities in Japanese Arable Andisols Investigated by Amplicon Sequencing of 18S rRNA Genes
title_short Eukaryotic Microbial Communities in Japanese Arable Andisols Investigated by Amplicon Sequencing of 18S rRNA Genes
title_sort eukaryotic microbial communities in japanese arable andisols investigated by amplicon sequencing of 18s rrna genes
topic Amplicon Sequence Collections
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7272547/
https://www.ncbi.nlm.nih.gov/pubmed/32499366
http://dx.doi.org/10.1128/MRA.00218-20
work_keys_str_mv AT misekazumori eukaryoticmicrobialcommunitiesinjapanesearableandisolsinvestigatedbyampliconsequencingof18srrnagenes
AT otsukashigeto eukaryoticmicrobialcommunitiesinjapanesearableandisolsinvestigatedbyampliconsequencingof18srrnagenes

Ejemplares similares