Cargando…

Complete Genome Sequence of a SARS-CoV-2 Strain Isolated in Northern Germany

Here, we describe the complete genome sequence of a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) strain isolated from an oropharyngeal swab sample from a female patient with COVID-19 who was infected in Hamburg, northern Germany.

Detalles Bibliográficos
Autores principales:	Pfefferle, Susanne, Huang, Jiabin, Nörz, Dominik, Indenbirken, Daniela, Lütgehetmann, Marc, Oestereich, Lisa, Günther, Thomas, Grundhoff, Adam, Aepfelbacher, Martin, Fischer, Nicole
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	American Society for Microbiology 2020
Materias:	Genome Sequences
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7272567/ https://www.ncbi.nlm.nih.gov/pubmed/32499358 http://dx.doi.org/10.1128/MRA.00520-20

Ejemplares similares

SARS Coronavirus-2 variant tracing within the first Coronavirus Disease 19 clusters in northern Germany
por: Pfefferle, Susanne, et al.
Publicado: (2021)

Pushing beyond specifications: Evaluation of linearity and clinical performance of the cobas 6800/8800 SARS-CoV-2 RT-PCR assay for reliable quantification in blood and other materials outside recommendations
por: Nörz, Dominik, et al.
Publicado: (2020)

Modifying a Diagnostic SARS-CoV-2 Spike PCR to Turn a Del69/70 Dropout into a Discriminatory On-Target Assay
por: Nörz, Dominik, et al.
Publicado: (2021)

Rapid Automated Screening for SARS-CoV-2 B.1.617 Lineage Variants (Delta/Kappa) through a Versatile Toolset of qPCR-Based SNP Detection
por: Nörz, Dominik, et al.
Publicado: (2021)

Draft Genome Sequence of the Green Alga Scenedesmus acuminatus SAG 38.81
por: Astafyeva, Yekaterina, et al.
Publicado: (2020)

Evaluation of a fully automated high-throughput SARS-CoV-2 multiplex qPCR assay with built-in screening functionality for del-HV69/70- and N501Y variants such as B.1.1.7
por: Nörz, Dominik, et al.
Publicado: (2021)

Clinical evaluation of a fully automated, laboratory-developed multiplex RT-PCR assay integrating dual-target SARS-CoV-2 and influenza A/B detection on a high-throughput platform
por: Nörz, Dominik, et al.
Publicado: (2021)

Clinical Evaluation of a Fully-Automated High-Throughput Multiplex Screening-Assay to Detect and Differentiate the SARS-CoV-2 B.1.1.529 (Omicron) and B.1.617.2 (Delta) Lineage Variants
por: Nörz, Dominik, et al.
Publicado: (2022)

Comparing susceptibility and contagiousness in concurrent outbreaks with a non-VOC and the VOC SARS-CoV-2 variant B.1.1.7 in daycare centers in Hamburg, Germany
por: Nakel, Jacqueline, et al.
Publicado: (2022)

Clinical evaluation of a SARS-CoV-2 RT-PCR assay on a fully automated system for rapid on-demand testing in the hospital setting
por: Nörz, Dominik, et al.
Publicado: (2020)

Complete Genome Sequence of Psychrobacillus sp. Strain INOP01, a Phosphate-Solubilizing Bacterium Isolated from an Agricultural Soil in Germany
por: Chiba, Akane, et al.
Publicado: (2022)

Complete genome sequences of eight Auritidibacter ignavus strains isolated from ear infections in Germany
por: Bähr, Tobias, et al.
Publicado: (2023)

Complete Genome Sequence of Escherichia coli GW-AmxH19, Isolated from Hospital Wastewater in Greifswald, Germany
por: Schneider, Dominik, et al.
Publicado: (2020)

Complete Genome Sequence of Pseudomonas sp. Strain MM213, an Isolate from a Brookside in Bielefeld, Germany
por: Verwaaijen, Bart, et al.
Publicado: (2022)

Nearly Complete Genome Sequences of Enterovirus 96 and Enterovirus 99 Strains Isolated in the Northern Region of Brazil
por: Scerni Machado, R., et al.
Publicado: (2019)

Complete Genome Sequence of Citrobacter braakii GW-Imi-1b1, Isolated from Hospital Wastewater in Greifswald, Germany
por: Schneider, Dominik, et al.
Publicado: (2023)

Complete genome sequence of a Staphylococcus condimenti isolated from a port catheter-associated bloodstream infection
por: Berneking, Laura, et al.
Publicado: (2023)

Rapid Metagenomic Diagnostics for Suspected Outbreak of Severe Pneumonia
por: Fischer, Nicole, et al.
Publicado: (2014)

Draft Genome Sequence of Andreprevotia sp. Strain IGB-42, a Chitinolytic Bacterium Isolated from a Soil Sample of an Anthill in Stuttgart, Germany
por: Vainshtein, Yevhen, et al.
Publicado: (2020)

Complete Genome Sequences of Pseudomonas sp. Strains MM223 and MM227 and Rheinheimera sp. Strain MM224, Isolated from a Pond Edge in Bielefeld, Germany
por: Frommer, Bianca, et al.
Publicado: (2023)

Rapid Adaptation of Established High-Throughput Molecular Testing Infrastructure for Monkeypox Virus Detection
por: Nörz, Dominik, et al.
Publicado: (2022)

Metagenome-Assembled Genome Sequences from Different Wastewater Treatment Stages in Germany
por: Schneider, Dominik, et al.
Publicado: (2021)

Complete Genomic Sequences of Campylobacter coli Strains Isolated from Poultry Sold in Pennsylvania Farmers’ Markets
por: Gunther, Nereus W., et al.
Publicado: (2021)

Complete Genome Sequence of Avian Pathogenic Escherichia coli Strain APEC O2-211
por: Nielsen, Daniel W., et al.
Publicado: (2018)

DAMIAN: an open source bioinformatics tool for fast, systematic and cohort based analysis of microorganisms in diagnostic samples
por: Alawi, Malik, et al.
Publicado: (2019)

Draft Genome Sequences of Pseudomonas sp. Strains Isolated from Wheat in Germany
por: Hollmann, Jürgen, et al.
Publicado: (2019)

Handling and accuracy of four rapid antigen tests for the diagnosis of SARS-CoV-2 compared to RT-qPCR
por: Olearo, Flaminia, et al.
Publicado: (2021)

Complete Genome Sequence of a Soybean Dwarf Virus Isolate from White Clover in Germany
por: Gaafar, Yahya Z. A., et al.
Publicado: (2020)

Draft Genome Sequence of Bordetella sp. Strain FB-8, Isolated from a Former Uranium Mining Area in Germany
por: Harris, Cassandra R., et al.
Publicado: (2021)

Complete Genome Sequences of Two Rhodobacter Strains
por: Anton, Brian P., et al.
Publicado: (2018)

Complete Genome Sequence of a Salmonella enterica subsp. enterica Serovar Tennessee Strain from Tahini
por: Schlund, Olga, et al.
Publicado: (2022)

Complete Genome Sequences of Two Rhodococcus sp. Strains with Large and Linear Chromosomes, Isolated from Apple Rhizosphere
por: Benning, Sarah, et al.
Publicado: (2021)

Complete Genome Sequence of Campylobacter jejuni Strain NADC 20827, Isolated from Commercial Turkeys
por: Nielsen, Daniel W., et al.
Publicado: (2020)

Complete Genome Sequence of Lactobacillus fermentum Strain AGR1485, a Human Oral Isolate
por: Bailie, Marc A., et al.
Publicado: (2020)

Complete Genome Sequence of Bacillus velezensis Strain S4, Isolated from Biochar-Treated Soil
por: Hempel, Priscilla P., et al.
Publicado: (2020)

Complete Genome Sequence of the Citrobacter freundii Type Strain
por: Wan, Kenneth H., et al.
Publicado: (2020)

Complete Genome Sequence of Mycobacterium orygis Strain 51145
por: Rufai, Syed Beenish, et al.
Publicado: (2021)

Complete Genome Sequence of Lentilactobacillus parabuchneri Strain KEM
por: Park, Jongsun, et al.
Publicado: (2021)

Complete genome sequences of nine Burkholderia pseudomallei strains
por: Nishida, Takashi, et al.
Publicado: (2023)

Complete Genome Sequences of Eight Faecalibacterium sp. Strains Isolated from Healthy Human Stool
por: Fraccascia, Davide, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_n39ad1f2tfojngg3ljiaa5gbvd