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Metabolic Profiles of Carbohydrates in Streptococcus thermophilus During pH-Controlled Batch Fermentation

Revealing the metabolic profiles of carbohydrates with their regulatory genes and metabolites is conducive to understanding their mechanism of utilization in Streptococcus thermophilus MN-ZLW-002 during pH-controlled batch fermentation. Transcriptomics and metabolomics were used to study carbohydrat...

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Autores principales: Liu, Gefei, Qiao, Yali, Zhang, Yanjiao, Leng, Cong, Chen, Hongyu, Sun, Jiahui, Fan, Xuejing, Li, Aili, Feng, Zhen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7272703/
https://www.ncbi.nlm.nih.gov/pubmed/32547529
http://dx.doi.org/10.3389/fmicb.2020.01131
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author Liu, Gefei
Qiao, Yali
Zhang, Yanjiao
Leng, Cong
Chen, Hongyu
Sun, Jiahui
Fan, Xuejing
Li, Aili
Feng, Zhen
author_facet Liu, Gefei
Qiao, Yali
Zhang, Yanjiao
Leng, Cong
Chen, Hongyu
Sun, Jiahui
Fan, Xuejing
Li, Aili
Feng, Zhen
author_sort Liu, Gefei
collection PubMed
description Revealing the metabolic profiles of carbohydrates with their regulatory genes and metabolites is conducive to understanding their mechanism of utilization in Streptococcus thermophilus MN-ZLW-002 during pH-controlled batch fermentation. Transcriptomics and metabolomics were used to study carbohydrate metabolism. More than 200 unigenes were involved in carbohydrate transport. Of these unigenes, 55 were involved in the phosphotransferase system (PTS), which had higher expression levels than those involved in ABC protein-dependent systems, permeases, and symporters. The expression levels of the genes involved in the carbohydrate transport systems and phosphate transport system were high at the end-lag and end-exponential growth phases, respectively. In addition, 166 differentially expressed genes (DEGs) associated with carbohydrate metabolism were identified. Most genes had their highest expression levels at the end-lag phase. The pfk, ldh, zwf, and E3.2.1.21 genes involved in the glycolytic pathway had higher expression levels at the end-exponential growth phase than the mid-exponential growth phase. The results showed high expression levels of lacZ and galKTM genes and reabsorption of extracellular galactose. S. thermophilus MN-ZLW-002 can metabolize and utilize galactose. Overall, this comprehensive network of carbohydrate metabolism is useful for further studies of the control of glycolytic pathway during the high-density culture of S. thermophilus.
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spelling pubmed-72727032020-06-15 Metabolic Profiles of Carbohydrates in Streptococcus thermophilus During pH-Controlled Batch Fermentation Liu, Gefei Qiao, Yali Zhang, Yanjiao Leng, Cong Chen, Hongyu Sun, Jiahui Fan, Xuejing Li, Aili Feng, Zhen Front Microbiol Microbiology Revealing the metabolic profiles of carbohydrates with their regulatory genes and metabolites is conducive to understanding their mechanism of utilization in Streptococcus thermophilus MN-ZLW-002 during pH-controlled batch fermentation. Transcriptomics and metabolomics were used to study carbohydrate metabolism. More than 200 unigenes were involved in carbohydrate transport. Of these unigenes, 55 were involved in the phosphotransferase system (PTS), which had higher expression levels than those involved in ABC protein-dependent systems, permeases, and symporters. The expression levels of the genes involved in the carbohydrate transport systems and phosphate transport system were high at the end-lag and end-exponential growth phases, respectively. In addition, 166 differentially expressed genes (DEGs) associated with carbohydrate metabolism were identified. Most genes had their highest expression levels at the end-lag phase. The pfk, ldh, zwf, and E3.2.1.21 genes involved in the glycolytic pathway had higher expression levels at the end-exponential growth phase than the mid-exponential growth phase. The results showed high expression levels of lacZ and galKTM genes and reabsorption of extracellular galactose. S. thermophilus MN-ZLW-002 can metabolize and utilize galactose. Overall, this comprehensive network of carbohydrate metabolism is useful for further studies of the control of glycolytic pathway during the high-density culture of S. thermophilus. Frontiers Media S.A. 2020-05-29 /pmc/articles/PMC7272703/ /pubmed/32547529 http://dx.doi.org/10.3389/fmicb.2020.01131 Text en Copyright © 2020 Liu, Qiao, Zhang, Leng, Chen, Sun, Fan, Li and Feng. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Liu, Gefei
Qiao, Yali
Zhang, Yanjiao
Leng, Cong
Chen, Hongyu
Sun, Jiahui
Fan, Xuejing
Li, Aili
Feng, Zhen
Metabolic Profiles of Carbohydrates in Streptococcus thermophilus During pH-Controlled Batch Fermentation
title Metabolic Profiles of Carbohydrates in Streptococcus thermophilus During pH-Controlled Batch Fermentation
title_full Metabolic Profiles of Carbohydrates in Streptococcus thermophilus During pH-Controlled Batch Fermentation
title_fullStr Metabolic Profiles of Carbohydrates in Streptococcus thermophilus During pH-Controlled Batch Fermentation
title_full_unstemmed Metabolic Profiles of Carbohydrates in Streptococcus thermophilus During pH-Controlled Batch Fermentation
title_short Metabolic Profiles of Carbohydrates in Streptococcus thermophilus During pH-Controlled Batch Fermentation
title_sort metabolic profiles of carbohydrates in streptococcus thermophilus during ph-controlled batch fermentation
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7272703/
https://www.ncbi.nlm.nih.gov/pubmed/32547529
http://dx.doi.org/10.3389/fmicb.2020.01131
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