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A collaborative online AI engine for CT-based COVID-19 diagnosis
Artificial intelligence can potentially provide a substantial role in streamlining chest computed tomography (CT) diagnosis of COVID-19 patients. However, several critical hurdles have impeded the development of robust AI model, which include deficiency, isolation, and heterogeneity of CT data gener...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7273252/ https://www.ncbi.nlm.nih.gov/pubmed/32511484 http://dx.doi.org/10.1101/2020.05.10.20096073 |
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author | Xu, Yongchao Ma, Liya Yang, Fan Chen, Yanyan Ma, Ke Yang, Jiehua Yang, Xian Chen, Yaobing Shu, Chang Fan, Ziwei Gan, Jiefeng Zou, Xinyu Huang, Renhao Zhang, Changzheng Liu, Xiaowu Tu, Dandan Xu, Chuou Zhang, Wenqing Yang, Dehua Wang, Ming-Wei Wang, Xi Xie, Xiaoliang Leng, Hongxiang Holalkere, Nagaraj Halin, Neil J. Kamel, Ihab Roushdy Wu, Jia Peng, Xuehua Wang, Xiang Shao, Jianbo Mongkolwat, Pattanasak Zhang, Jianjun Rubin, Daniel L. Wang, Guoping Zheng, Chuangsheng Li, Zhen Bai, Xiang Xia, Tian |
author_facet | Xu, Yongchao Ma, Liya Yang, Fan Chen, Yanyan Ma, Ke Yang, Jiehua Yang, Xian Chen, Yaobing Shu, Chang Fan, Ziwei Gan, Jiefeng Zou, Xinyu Huang, Renhao Zhang, Changzheng Liu, Xiaowu Tu, Dandan Xu, Chuou Zhang, Wenqing Yang, Dehua Wang, Ming-Wei Wang, Xi Xie, Xiaoliang Leng, Hongxiang Holalkere, Nagaraj Halin, Neil J. Kamel, Ihab Roushdy Wu, Jia Peng, Xuehua Wang, Xiang Shao, Jianbo Mongkolwat, Pattanasak Zhang, Jianjun Rubin, Daniel L. Wang, Guoping Zheng, Chuangsheng Li, Zhen Bai, Xiang Xia, Tian |
author_sort | Xu, Yongchao |
collection | PubMed |
description | Artificial intelligence can potentially provide a substantial role in streamlining chest computed tomography (CT) diagnosis of COVID-19 patients. However, several critical hurdles have impeded the development of robust AI model, which include deficiency, isolation, and heterogeneity of CT data generated from diverse institutions. These bring about lack of generalization of AI model and therefore prevent it from applications in clinical practices. To overcome this, we proposed a federated learning-based Unified CT-COVID AI Diagnostic Initiative (UCADI, http://www.ai-ct-covid.team/), a decentralized architecture where the AI model is distributed to and executed at each host institution with the data sources or client ends for training and inferencing without sharing individual patient data. Specifically, we firstly developed an initial AI CT model based on data collected from three Tongji hospitals in Wuhan. After model evaluation, we found that the initial model can identify COVID from Tongji CT test data at near radiologist-level (97.5% sensitivity) but performed worse when it was tested on COVID cases from Wuhan Union Hospital (72% sensitivity), indicating a lack of model generalization. Next, we used the publicly available UCADI framework to build a federated model which integrated COVID CT cases from the Tongji hospitals and Wuhan Union hospital (WU) without transferring the WU data. The federated model not only performed similarly on Tongji test data but improved the detection sensitivity (98%) on WU test cases. The UCADI framework will allow participants worldwide to use and contribute to the model, to deliver a real-world, globally built and validated clinic CT-COVID AI tool. This effort directly supports the United Nations Sustainable Development Goals’ number 3, Good Health and Well-Being, and allows sharing and transferring of knowledge to fight this devastating disease around the world. |
format | Online Article Text |
id | pubmed-7273252 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-72732522020-06-07 A collaborative online AI engine for CT-based COVID-19 diagnosis Xu, Yongchao Ma, Liya Yang, Fan Chen, Yanyan Ma, Ke Yang, Jiehua Yang, Xian Chen, Yaobing Shu, Chang Fan, Ziwei Gan, Jiefeng Zou, Xinyu Huang, Renhao Zhang, Changzheng Liu, Xiaowu Tu, Dandan Xu, Chuou Zhang, Wenqing Yang, Dehua Wang, Ming-Wei Wang, Xi Xie, Xiaoliang Leng, Hongxiang Holalkere, Nagaraj Halin, Neil J. Kamel, Ihab Roushdy Wu, Jia Peng, Xuehua Wang, Xiang Shao, Jianbo Mongkolwat, Pattanasak Zhang, Jianjun Rubin, Daniel L. Wang, Guoping Zheng, Chuangsheng Li, Zhen Bai, Xiang Xia, Tian medRxiv Article Artificial intelligence can potentially provide a substantial role in streamlining chest computed tomography (CT) diagnosis of COVID-19 patients. However, several critical hurdles have impeded the development of robust AI model, which include deficiency, isolation, and heterogeneity of CT data generated from diverse institutions. These bring about lack of generalization of AI model and therefore prevent it from applications in clinical practices. To overcome this, we proposed a federated learning-based Unified CT-COVID AI Diagnostic Initiative (UCADI, http://www.ai-ct-covid.team/), a decentralized architecture where the AI model is distributed to and executed at each host institution with the data sources or client ends for training and inferencing without sharing individual patient data. Specifically, we firstly developed an initial AI CT model based on data collected from three Tongji hospitals in Wuhan. After model evaluation, we found that the initial model can identify COVID from Tongji CT test data at near radiologist-level (97.5% sensitivity) but performed worse when it was tested on COVID cases from Wuhan Union Hospital (72% sensitivity), indicating a lack of model generalization. Next, we used the publicly available UCADI framework to build a federated model which integrated COVID CT cases from the Tongji hospitals and Wuhan Union hospital (WU) without transferring the WU data. The federated model not only performed similarly on Tongji test data but improved the detection sensitivity (98%) on WU test cases. The UCADI framework will allow participants worldwide to use and contribute to the model, to deliver a real-world, globally built and validated clinic CT-COVID AI tool. This effort directly supports the United Nations Sustainable Development Goals’ number 3, Good Health and Well-Being, and allows sharing and transferring of knowledge to fight this devastating disease around the world. Cold Spring Harbor Laboratory 2020-05-19 /pmc/articles/PMC7273252/ /pubmed/32511484 http://dx.doi.org/10.1101/2020.05.10.20096073 Text en http://creativecommons.org/licenses/by-nc/4.0/It is made available under a CC-BY-NC 4.0 International license (http://creativecommons.org/licenses/by-nc/4.0/) . |
spellingShingle | Article Xu, Yongchao Ma, Liya Yang, Fan Chen, Yanyan Ma, Ke Yang, Jiehua Yang, Xian Chen, Yaobing Shu, Chang Fan, Ziwei Gan, Jiefeng Zou, Xinyu Huang, Renhao Zhang, Changzheng Liu, Xiaowu Tu, Dandan Xu, Chuou Zhang, Wenqing Yang, Dehua Wang, Ming-Wei Wang, Xi Xie, Xiaoliang Leng, Hongxiang Holalkere, Nagaraj Halin, Neil J. Kamel, Ihab Roushdy Wu, Jia Peng, Xuehua Wang, Xiang Shao, Jianbo Mongkolwat, Pattanasak Zhang, Jianjun Rubin, Daniel L. Wang, Guoping Zheng, Chuangsheng Li, Zhen Bai, Xiang Xia, Tian A collaborative online AI engine for CT-based COVID-19 diagnosis |
title | A collaborative online AI engine for CT-based COVID-19 diagnosis |
title_full | A collaborative online AI engine for CT-based COVID-19 diagnosis |
title_fullStr | A collaborative online AI engine for CT-based COVID-19 diagnosis |
title_full_unstemmed | A collaborative online AI engine for CT-based COVID-19 diagnosis |
title_short | A collaborative online AI engine for CT-based COVID-19 diagnosis |
title_sort | collaborative online ai engine for ct-based covid-19 diagnosis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7273252/ https://www.ncbi.nlm.nih.gov/pubmed/32511484 http://dx.doi.org/10.1101/2020.05.10.20096073 |
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