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Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck

The SARS-CoV-2 pandemic has caused a severe international shortage of the nasopharyngeal swabs that are required for collection of optimal specimens, creating a critical bottleneck in the way of high-sensitivity virological testing for COVID-19. To address this crisis, we designed and executed an in...

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Autores principales: Callahan, Cody J, Lee, Rose, Zulauf, Katelyn E., Tamburello, Lauren, Smith, Kenneth P., Previtera, Joe, Cheng, Annie, Green, Alex, Azim, Ahmed Abdul, Yano, Amanda, Doraiswami, Nancy, Kirby, James E., Arnaout, Ramy A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7273259/
https://www.ncbi.nlm.nih.gov/pubmed/32511491
http://dx.doi.org/10.1101/2020.04.14.20065094
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author Callahan, Cody J
Lee, Rose
Zulauf, Katelyn E.
Tamburello, Lauren
Smith, Kenneth P.
Previtera, Joe
Cheng, Annie
Green, Alex
Azim, Ahmed Abdul
Yano, Amanda
Doraiswami, Nancy
Kirby, James E.
Arnaout, Ramy A.
author_facet Callahan, Cody J
Lee, Rose
Zulauf, Katelyn E.
Tamburello, Lauren
Smith, Kenneth P.
Previtera, Joe
Cheng, Annie
Green, Alex
Azim, Ahmed Abdul
Yano, Amanda
Doraiswami, Nancy
Kirby, James E.
Arnaout, Ramy A.
author_sort Callahan, Cody J
collection PubMed
description The SARS-CoV-2 pandemic has caused a severe international shortage of the nasopharyngeal swabs that are required for collection of optimal specimens, creating a critical bottleneck in the way of high-sensitivity virological testing for COVID-19. To address this crisis, we designed and executed an innovative, radically cooperative, rapid-response translational-research program that brought together healthcare workers, manufacturers, and scientists to emergently develop and clinically validate new swabs for immediate mass production by 3D printing. We performed a rigorous multi-step preclinical evaluation on 160 swab designs and 48 materials from 24 companies, laboratories, and individuals, and shared results and other feedback via a public data repository (http://github.com/rarnaout/Covidswab/). We validated four prototypes through an institutional review board (IRB)-approved clinical trial that involved 276 outpatient volunteers who presented to our hospital’s drive-through testing center with symptoms suspicious for COVID-19. Each participant was swabbed with a reference swab (the control) and a prototype, and SARS-CoV-2 reverse-transcriptase polymerase chain reaction (RT-PCR) results were compared. All prototypes displayed excellent concordance with the control (κ=0.85–0.89). Cycle-threshold (Ct) values were not significantly different between each prototype and the control, supporting the new swabs’ non-inferiority (Mann-Whitney U [MWU] p>0.05). Study staff preferred one of the prototypes over the others and the control swab overall. The total time elapsed between identification of the problem and validation of the first prototype was 22 days. Contact information for ordering can be found at http://printedswabs.org. Our experience holds lessons for the rapid development, validation, and deployment of new technology for this pandemic and beyond.
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spelling pubmed-72732592020-06-07 Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck Callahan, Cody J Lee, Rose Zulauf, Katelyn E. Tamburello, Lauren Smith, Kenneth P. Previtera, Joe Cheng, Annie Green, Alex Azim, Ahmed Abdul Yano, Amanda Doraiswami, Nancy Kirby, James E. Arnaout, Ramy A. medRxiv Article The SARS-CoV-2 pandemic has caused a severe international shortage of the nasopharyngeal swabs that are required for collection of optimal specimens, creating a critical bottleneck in the way of high-sensitivity virological testing for COVID-19. To address this crisis, we designed and executed an innovative, radically cooperative, rapid-response translational-research program that brought together healthcare workers, manufacturers, and scientists to emergently develop and clinically validate new swabs for immediate mass production by 3D printing. We performed a rigorous multi-step preclinical evaluation on 160 swab designs and 48 materials from 24 companies, laboratories, and individuals, and shared results and other feedback via a public data repository (http://github.com/rarnaout/Covidswab/). We validated four prototypes through an institutional review board (IRB)-approved clinical trial that involved 276 outpatient volunteers who presented to our hospital’s drive-through testing center with symptoms suspicious for COVID-19. Each participant was swabbed with a reference swab (the control) and a prototype, and SARS-CoV-2 reverse-transcriptase polymerase chain reaction (RT-PCR) results were compared. All prototypes displayed excellent concordance with the control (κ=0.85–0.89). Cycle-threshold (Ct) values were not significantly different between each prototype and the control, supporting the new swabs’ non-inferiority (Mann-Whitney U [MWU] p>0.05). Study staff preferred one of the prototypes over the others and the control swab overall. The total time elapsed between identification of the problem and validation of the first prototype was 22 days. Contact information for ordering can be found at http://printedswabs.org. Our experience holds lessons for the rapid development, validation, and deployment of new technology for this pandemic and beyond. Cold Spring Harbor Laboratory 2020-05-07 /pmc/articles/PMC7273259/ /pubmed/32511491 http://dx.doi.org/10.1101/2020.04.14.20065094 Text en https://creativecommons.org/licenses/by-nd/4.0/This work is licensed under a Creative Commons Attribution-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, and only so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Callahan, Cody J
Lee, Rose
Zulauf, Katelyn E.
Tamburello, Lauren
Smith, Kenneth P.
Previtera, Joe
Cheng, Annie
Green, Alex
Azim, Ahmed Abdul
Yano, Amanda
Doraiswami, Nancy
Kirby, James E.
Arnaout, Ramy A.
Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck
title Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck
title_full Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck
title_fullStr Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck
title_full_unstemmed Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck
title_short Open Development and Clinical Validation Of Multiple 3D-Printed Sample-Collection Swabs: Rapid Resolution of a Critical COVID-19 Testing Bottleneck
title_sort open development and clinical validation of multiple 3d-printed sample-collection swabs: rapid resolution of a critical covid-19 testing bottleneck
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7273259/
https://www.ncbi.nlm.nih.gov/pubmed/32511491
http://dx.doi.org/10.1101/2020.04.14.20065094
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