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Rewiring the “Push-Pull” Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code

[Image: see text] Nature employs a limited number of genetically encoded axial ligands to control diverse heme enzyme activities. Deciphering the functional significance of these ligands requires a quantitative understanding of how their electron-donating capabilities modulate the structures and rea...

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Autores principales: Ortmayer, Mary, Fisher, Karl, Basran, Jaswir, Wolde-Michael, Emmanuel M., Heyes, Derren J., Levy, Colin, Lovelock, Sarah L., Anderson, J. L. Ross, Raven, Emma L., Hay, Sam, Rigby, Stephen E. J., Green, Anthony P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2020
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7273622/
https://www.ncbi.nlm.nih.gov/pubmed/32550044
http://dx.doi.org/10.1021/acscatal.9b05129
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author Ortmayer, Mary
Fisher, Karl
Basran, Jaswir
Wolde-Michael, Emmanuel M.
Heyes, Derren J.
Levy, Colin
Lovelock, Sarah L.
Anderson, J. L. Ross
Raven, Emma L.
Hay, Sam
Rigby, Stephen E. J.
Green, Anthony P.
author_facet Ortmayer, Mary
Fisher, Karl
Basran, Jaswir
Wolde-Michael, Emmanuel M.
Heyes, Derren J.
Levy, Colin
Lovelock, Sarah L.
Anderson, J. L. Ross
Raven, Emma L.
Hay, Sam
Rigby, Stephen E. J.
Green, Anthony P.
author_sort Ortmayer, Mary
collection PubMed
description [Image: see text] Nature employs a limited number of genetically encoded axial ligands to control diverse heme enzyme activities. Deciphering the functional significance of these ligands requires a quantitative understanding of how their electron-donating capabilities modulate the structures and reactivities of the iconic ferryl intermediates compounds I and II. However, probing these relationships experimentally has proven to be challenging as ligand substitutions accessible via conventional mutagenesis do not allow fine tuning of electron donation and typically abolish catalytic function. Here, we exploit engineered translation components to replace the histidine ligand of cytochrome c peroxidase (CcP) by a less electron-donating N(δ)-methyl histidine (Me-His) with little effect on the enzyme structure. The rate of formation (k(1)) and the reactivity (k(2)) of compound I are unaffected by ligand substitution. In contrast, proton-coupled electron transfer to compound II (k(3)) is 10-fold slower in CcP Me-His, providing a direct link between electron donation and compound II reactivity, which can be explained by weaker electron donation from the Me-His ligand (“the push”) affording an electron-deficient ferryl oxygen with reduced proton affinity (“the pull”). The deleterious effects of the Me-His ligand can be fully compensated by introducing a W51F mutation designed to increase “the pull” by removing a hydrogen bond to the ferryl oxygen. Analogous substitutions in ascorbate peroxidase lead to similar activity trends to those observed in CcP, suggesting that a common mechanistic strategy is employed by enzymes using distinct electron transfer pathways. Our study highlights how noncanonical active site substitutions can be used to directly probe and deconstruct highly evolved bioinorganic mechanisms.
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spelling pubmed-72736222020-06-15 Rewiring the “Push-Pull” Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code Ortmayer, Mary Fisher, Karl Basran, Jaswir Wolde-Michael, Emmanuel M. Heyes, Derren J. Levy, Colin Lovelock, Sarah L. Anderson, J. L. Ross Raven, Emma L. Hay, Sam Rigby, Stephen E. J. Green, Anthony P. ACS Catal [Image: see text] Nature employs a limited number of genetically encoded axial ligands to control diverse heme enzyme activities. Deciphering the functional significance of these ligands requires a quantitative understanding of how their electron-donating capabilities modulate the structures and reactivities of the iconic ferryl intermediates compounds I and II. However, probing these relationships experimentally has proven to be challenging as ligand substitutions accessible via conventional mutagenesis do not allow fine tuning of electron donation and typically abolish catalytic function. Here, we exploit engineered translation components to replace the histidine ligand of cytochrome c peroxidase (CcP) by a less electron-donating N(δ)-methyl histidine (Me-His) with little effect on the enzyme structure. The rate of formation (k(1)) and the reactivity (k(2)) of compound I are unaffected by ligand substitution. In contrast, proton-coupled electron transfer to compound II (k(3)) is 10-fold slower in CcP Me-His, providing a direct link between electron donation and compound II reactivity, which can be explained by weaker electron donation from the Me-His ligand (“the push”) affording an electron-deficient ferryl oxygen with reduced proton affinity (“the pull”). The deleterious effects of the Me-His ligand can be fully compensated by introducing a W51F mutation designed to increase “the pull” by removing a hydrogen bond to the ferryl oxygen. Analogous substitutions in ascorbate peroxidase lead to similar activity trends to those observed in CcP, suggesting that a common mechanistic strategy is employed by enzymes using distinct electron transfer pathways. Our study highlights how noncanonical active site substitutions can be used to directly probe and deconstruct highly evolved bioinorganic mechanisms. American Chemical Society 2020-01-29 2020-02-21 /pmc/articles/PMC7273622/ /pubmed/32550044 http://dx.doi.org/10.1021/acscatal.9b05129 Text en Copyright © 2020 American Chemical Society This is an open access article published under a Creative Commons Attribution (CC-BY) License (http://pubs.acs.org/page/policy/authorchoice_ccby_termsofuse.html) , which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.
spellingShingle Ortmayer, Mary
Fisher, Karl
Basran, Jaswir
Wolde-Michael, Emmanuel M.
Heyes, Derren J.
Levy, Colin
Lovelock, Sarah L.
Anderson, J. L. Ross
Raven, Emma L.
Hay, Sam
Rigby, Stephen E. J.
Green, Anthony P.
Rewiring the “Push-Pull” Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code
title Rewiring the “Push-Pull” Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code
title_full Rewiring the “Push-Pull” Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code
title_fullStr Rewiring the “Push-Pull” Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code
title_full_unstemmed Rewiring the “Push-Pull” Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code
title_short Rewiring the “Push-Pull” Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code
title_sort rewiring the “push-pull” catalytic machinery of a heme enzyme using an expanded genetic code
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7273622/
https://www.ncbi.nlm.nih.gov/pubmed/32550044
http://dx.doi.org/10.1021/acscatal.9b05129
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